Gene Sbal_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3020 
Symbol 
ID4845186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand+ 
Start bp3545287 
End bp3545712 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content46% 
IMG OID640120268 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_001051371 
Protein GI126175222 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00101053 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCGA AAACCGTATT AGGCTTTGAT TTTGGCACTA AAAGTATTGG TGTGGCCATA 
GGCCAAGAAA TCACCGCTAG CGCCACGCCA TTGTTGTCAA TCAAAGCCGT CGATGGAATA 
CCCAACTGGG ATCAAATAGG CGACTTAATC AAAGAGTGGC AACCCGACTT AGTGGTCGTC 
GGCCTGCCCT TAAACATGGA TGGCACTGAG CAAGATATGA CCCACAGGGC GCGTAAATTT 
GCGAACCGTA TCAATGCTAA GTTCAAAGTC AAAATAGCCA CTCAAGATGA ACGATTAACC 
ACTACCGATG CTAAGGCGAG ATTATTCGAG TTAGGCGGAT TCAAGGCGCT CACCAAAGGC 
CAAGTCGATG CTGTGTCTGC CGTACTGATT ATTGAAAGCT ACTTCGAAAA TAACTTCAGC 
AAGTAA
 
Protein sequence
MNSKTVLGFD FGTKSIGVAI GQEITASATP LLSIKAVDGI PNWDQIGDLI KEWQPDLVVV 
GLPLNMDGTE QDMTHRARKF ANRINAKFKV KIATQDERLT TTDAKARLFE LGGFKALTKG 
QVDAVSAVLI IESYFENNFS K