| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1198 |
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| Symbol | |
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| ID | 4251237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1401019 |
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| End bp | 1401444 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638117783 |
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| Product | Holliday junction resolvase-like protein |
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| Protein accession | YP_733335 |
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| Protein GI | 113969542 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000276178 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCAA AAACCGTTTT AGGTTTTGAT TTTGGAACAA AAAGTATTGG TGTCGCCATA
GGGCAACAAA TCACCGCCAG CGCCACACCA CTGCTATCCC TAAAAGCCGT CGACGGTATT
CCCAATTGGG ATGAAATTGG CAAACTCATT AAAGAGTGGC AACCCGATTT AGTCGTCGTA
GGTTTACCGC TCAATATGGA TGGCACAGAG CAGGAAATGA CCCACAGGGC GAGAAAGTTC
GCCAACCGAC TGAACGCTAA GTTTGGGGTC AAAATTGTCA CTCAAGATGA AAGACTGACC
ACCACAGATG CAAAAGCTCG GCTATTTGAA CTCGGCGGCT TTAAAGCCCT CACCAAAGGT
CAAGTCGATG CAGTGTCAGC CGTATTGATT GTCGAAAGCT ATTTTGAAAA TCATTTCGGT
GAATAA
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| Protein sequence | MNAKTVLGFD FGTKSIGVAI GQQITASATP LLSLKAVDGI PNWDEIGKLI KEWQPDLVVV
GLPLNMDGTE QEMTHRARKF ANRLNAKFGV KIVTQDERLT TTDAKARLFE LGGFKALTKG
QVDAVSAVLI VESYFENHFG E
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