More than 300 homologs were found in PanDaTox collection
for query gene LACR_0138 on replicon NC_008527
Organism: Lactococcus lactis subsp. cremoris SK11



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008527  LACR_0138  Holliday junction resolvase-like protein  100 
 
 		 143 aa  285  1e-76  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  63.7 
 
 		 139 aa  166  7e-41  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
NC_004116  SAG2090  Holliday junction resolvase-like protein  63.16 
 
 		 136 aa  164  4e-40  Streptococcus agalactiae 2603V/R  Bacteria  hitchhiker  0.000724166  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  56.3 
 
 		 137 aa  155  2e-37  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_008531  LEUM_0558  Holliday junction resolvase-like protein  57.97 
 
 		 143 aa  154  4e-37  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  55.15 
 
 		 137 aa  153  1e-36  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  55.15 
 
 		 137 aa  153  1e-36  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  55.15 
 
 		 137 aa  153  1e-36  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  55.15 
 
 		 137 aa  153  1e-36  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  55.15 
 
 		 137 aa  153  1e-36  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  55.15 
 
 		 137 aa  153  1e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  57.35 
 
 		 138 aa  152  2e-36  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  55.97 
 
 		 137 aa  152  2e-36  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  55.97 
 
 		 137 aa  152  2e-36  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  55.56 
 
 		 137 aa  151  2e-36  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal  1 
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  56.3 
 
 		 137 aa  150  8e-36  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  56.62 
 
 		 138 aa  149  8.999999999999999e-36  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008528  OEOE_1165  RNase H-like ribonuclease  55.56 
 
 		 144 aa  146  9e-35  Oenococcus oeni PSU-1  Bacteria  normal  0.345189  n/a   
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  54.01 
 
 		 143 aa  140  5e-33  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009632  SaurJH1_1707  Holliday junction resolvase-like protein  50 
 
 		 142 aa  137  6e-32  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.24342  n/a   
 
 
-
 
NC_009487  SaurJH9_1673  Holliday junction resolvase-like protein  50 
 
 		 142 aa  137  6e-32  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.514842  n/a   
 
 
-
 
NC_002976  SERP1180  Holliday junction resolvase-like protein  50.74 
 
 		 142 aa  135  2e-31  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  51.45 
 
 		 147 aa  134  3.0000000000000003e-31  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  46.38 
 
 		 139 aa  121  4e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.0000233904 
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  48.18 
 
 		 137 aa  120  7e-27  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  47.76 
 
 		 140 aa  118  3e-26  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  44.78 
 
 		 142 aa  116  9.999999999999999e-26  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  45.26 
 
 		 139 aa  114  6e-25  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  44.12 
 
 		 139 aa  113  8.999999999999998e-25  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  48.89 
 
 		 150 aa  113  1.0000000000000001e-24  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  44.03 
 
 		 137 aa  112  1.0000000000000001e-24  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  44.03 
 
 		 137 aa  112  1.0000000000000001e-24  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  45.52 
 
 		 140 aa  108  2.0000000000000002e-23  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  43.88 
 
 		 141 aa  107  4.0000000000000004e-23  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.140554 
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  41.3 
 
 		 141 aa  105  2e-22  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  41.43 
 
 		 161 aa  105  3e-22  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_013440  Hoch_5401  Holliday junction resolvase YqgF  45 
 
 		 139 aa  103  9e-22  Haliangium ochraceum DSM 14365  Bacteria  normal  0.616966  normal  0.68966 
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  38.24 
 
 		 146 aa  101  4e-21  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  38.41 
 
 		 141 aa  100  6e-21  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  44.03 
 
 		 146 aa  100  8e-21  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  43.07 
 
 		 145 aa  99.8  1e-20  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_009952  Dshi_1064  Holliday junction resolvase-like protein  39.26 
 
 		 163 aa  99.4  1e-20  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.282287  normal  1 
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  39.85 
 
 		 157 aa  99  2e-20  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  38.97 
 
 		 146 aa  98.6  3e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  41.91 
 
 		 160 aa  97.8  4e-20  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal  1 
 
 
-
 
NC_007802  Jann_2181  Holliday junction resolvase YqgF  41.13 
 
 		 145 aa  97.4  5e-20  Jannaschia sp. CCS1  Bacteria  normal  0.659798  normal  1 
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  40.74 
 
 		 163 aa  96.3  1e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal  1 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  36.76 
 
 		 141 aa  96.3  1e-19  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal  1 
 
 
-
 
NC_010505  Mrad2831_0475  Holliday junction resolvase YqgF  40.58 
 
 		 170 aa  96.3  1e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.437798  normal  0.0955854 
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  38.06 
 
 		 142 aa  95.9  2e-19  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  38.41 
 
 		 141 aa  95.5  2e-19  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  41.04 
 
 		 222 aa  94.7  4e-19  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_009049  Rsph17029_1342  Holliday junction resolvase-like protein  41.79 
 
 		 160 aa  94.7  4e-19  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00888056  normal  0.184568 
 
 
-
 
NC_007493  RSP_2684  Holliday junction resolvase-like protein  41.79 
 
 		 160 aa  94.7  4e-19  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.173322  n/a   
 
 
-
 
NC_009092  Shew_1143  Holliday junction resolvase-like protein  34.07 
 
 		 139 aa  94.4  5e-19  Shewanella loihica PV-4  Bacteria  normal  0.997205  normal  0.0325702 
 
 
-
 
NC_008709  Ping_1285  Holliday junction resolvase YqgF  34.07 
 
 		 145 aa  94  7e-19  Psychromonas ingrahamii 37  Bacteria  normal  0.0394867  normal  1 
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  40.43 
 
 		 163 aa  92.8  1e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_3519  Holliday junction resolvase YqgF  40.15 
 
 		 165 aa  92.8  1e-18  Methylobacterium populi BJ001  Bacteria  normal  0.432695  normal  1 
 
 
-
 
NC_009485  BBta_4721  Holliday junction resolvase-like protein  44.36 
 
 		 161 aa  92.8  1e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  37.31 
 
 		 153 aa  92.8  1e-18  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  37.96 
 
 		 182 aa  93.2  1e-18  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  39.13 
 
 		 158 aa  92.8  1e-18  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal  1 
 
 
-
 
NC_009831  Ssed_1236  Holliday junction resolvase-like protein  34.59 
 
 		 139 aa  92.4  2e-18  Shewanella sediminis HAW-EB3  Bacteria  normal  0.578906  normal  0.405452 
 
 
-
 
NC_010511  M446_4344  Holliday junction resolvase YqgF  41.43 
 
 		 168 aa  92.4  2e-18  Methylobacterium sp. 4-46  Bacteria  normal  0.892789  normal  0.367855 
 
 
-
 
NC_004347  SO_3347  Holliday junction resolvase-like protein  36.03 
 
 		 141 aa  92  3e-18  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013441  Gbro_2321  Holliday junction resolvase YqgF  41.91 
 
 		 143 aa  91.7  3e-18  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_2004  Holliday junction resolvase-like protein  41.35 
 
 		 163 aa  91.7  3e-18  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.166059  normal  0.662003 
 
 
-
 
NC_008321  Shewmr4_1198  Holliday junction resolvase-like protein  35.29 
 
 		 141 aa  91.7  3e-18  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000276178  normal  1 
 
 
-
 
NC_008322  Shewmr7_1269  Holliday junction resolvase-like protein  35.29 
 
 		 141 aa  91.7  3e-18  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000329275  normal  1 
 
 
-
 
NC_008577  Shewana3_1199  Holliday junction resolvase-like protein  35.29 
 
 		 141 aa  91.7  3e-18  Shewanella sp. ANA-3  Bacteria  normal  0.0107111  normal  0.529497 
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  41.01 
 
 		 175 aa  91.3  4e-18  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.454353 
 
 
-
 
NC_009052  Sbal_3020  Holliday junction resolvase-like protein  34.78 
 
 		 141 aa  90.9  5e-18  Shewanella baltica OS155  Bacteria  hitchhiker  0.00101053  n/a   
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  35.07 
 
 		 146 aa  90.9  5e-18  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_3035  Holliday junction resolvase-like protein  34.78 
 
 		 141 aa  90.9  5e-18  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000814628  n/a   
 
 
-
 
NC_011663  Sbal223_1343  Holliday junction resolvase-like protein  34.78 
 
 		 141 aa  90.9  5e-18  Shewanella baltica OS223  Bacteria  hitchhiker  0.00897927  hitchhiker  0.00000000052642 
 
 
-
 
NC_009997  Sbal195_3178  Holliday junction resolvase-like protein  34.78 
 
 		 141 aa  90.9  5e-18  Shewanella baltica OS195  Bacteria  hitchhiker  0.000555794  normal  0.0157194 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  40 
 
 		 142 aa  90.5  6e-18  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal  1 
 
 
-
 
NC_010172  Mext_3319  Holliday junction resolvase YqgF  39.55 
 
 		 160 aa  90.9  6e-18  Methylobacterium extorquens PA1  Bacteria  normal  0.587532  normal  0.657687 
 
 
-
 
NC_009901  Spea_1131  Holliday junction resolvase-like protein  35.29 
 
 		 141 aa  90.5  6e-18  Shewanella pealeana ATCC 700345  Bacteria  normal  0.111461  n/a   
 
 
-
 
NC_011757  Mchl_3643  Holliday junction resolvase YqgF  39.55 
 
 		 165 aa  90.5  7e-18  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.724014 
 
 
-
 
NC_010506  Swoo_1336  Holliday junction resolvase-like protein  34.07 
 
 		 139 aa  90.5  7e-18  Shewanella woodyi ATCC 51908  Bacteria  normal  0.164432  hitchhiker  0.000378103 
 
 
-
 
NC_007954  Sden_2673  Holliday junction resolvase-like protein  34.53 
 
 		 141 aa  90.5  7e-18  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000201914  n/a   
 
 
-
 
NC_011666  Msil_0742  Holliday junction resolvase-like protein  37.68 
 
 		 161 aa  90.1  8e-18  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0120989 
 
 
-
 
NC_007958  RPD_3023  Holliday junction resolvase-like protein  41.35 
 
 		 160 aa  90.1  8e-18  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.438725  normal  0.394583 
 
 
-
 
NC_008345  Sfri_2849  Holliday junction resolvase-like protein  34.81 
 
 		 139 aa  90.5  8e-18  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_0941  Holliday junction resolvase-like protein  42.86 
 
 		 165 aa  89.4  1e-17  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.22726 
 
 
-
 
NC_011353  ECH74115_4252  Holliday junction resolvase-like protein  33.58 
 
 		 138 aa  89.4  1e-17  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.367892  normal  0.370097 
 
 
-
 
NC_008347  Mmar10_1708  Holliday junction resolvase YqgF  40.6 
 
 		 151 aa  90.1  1e-17  Maricaulis maris MCS10  Bacteria  normal  1  normal  0.180151 
 
 
-
 
NC_008700  Sama_2473  Holliday junction resolvase-like protein  34.06 
 
 		 139 aa  90.1  1e-17  Shewanella amazonensis SB2B  Bacteria  normal  0.641283  normal  1 
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  41.48 
 
 		 175 aa  90.1  1e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_3922  Holliday junction resolvase YqgF  40.28 
 
 		 176 aa  89.7  1e-17  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_5312  Holliday junction resolvase-like protein  36.03 
 
 		 145 aa  89  2e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0190801  normal  0.217295 
 
 
-
 
NC_010465  YPK_0836  Holliday junction resolvase-like protein  35.29 
 
 		 140 aa  89  2e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0695104  n/a   
 
 
-
 
NC_009708  YpsIP31758_0834  Holliday junction resolvase-like protein  35.29 
 
 		 140 aa  89  2e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_3091  Holliday junction resolvase-like protein  32.85 
 
 		 138 aa  88.6  2e-17  Escherichia coli SMS-3-5  Bacteria  normal  0.372008  decreased coverage  0.00000514809 
 
 
-
 
NC_010658  SbBS512_E3381  Holliday junction resolvase-like protein  32.85 
 
 		 138 aa  88.6  2e-17  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A3340  Holliday junction resolvase-like protein  35.29 
 
 		 140 aa  89  2e-17  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009801  EcE24377A_3292  Holliday junction resolvase-like protein  32.85 
 
 		 138 aa  88.6  2e-17  Escherichia coli E24377A  Bacteria  normal  0.684819  n/a   
 
 
-
 
CP001637  EcDH1_0746  Holliday junction resolvase YqgF  32.85 
 
 		 138 aa  88.6  3e-17  Escherichia coli DH1  Bacteria  normal  0.61838  n/a   
 
 
-
 
NC_010468  EcolC_0765  Holliday junction resolvase-like protein  32.85 
 
 		 138 aa  88.6  3e-17  Escherichia coli ATCC 8739  Bacteria  normal  0.809741  hitchhiker  0.0000191582 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>