| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1336 |
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| Symbol | |
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| ID | 6115576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1688638 |
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| End bp | 1689057 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632824 |
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| Product | Holliday junction resolvase-like protein |
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| Protein accession | YP_001759723 |
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| Protein GI | 170725697 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.164432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000378103 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGTTCAC AAACTGTCTT AGGCTTCGAC TACGGCACTA AGAGTATAGG TATCGCAATA
GGACAATCTC TGACAGGAAG TGCCAACCCA CTACTTTCAA TAAAGGCTGT GGATGGGATC
CCTAAGTGGG AAGAGATAGG TATGTTGATC GAAGAGTGGA GGCCCGATCT CGTCGTTGTG
GGTCTACCGC TTAATATGGA TGGTTCTGAG CAGGAGATGA CTCAAAGAGC AAAAAAGTTT
GCCAACAGGA TAAGCGGGCG ATTCGGTGTT AAAGTGGAGA CACAAGATGA GCGCTTAACC
ACTGCCGATG CTAAAACCAG ACTCTTTGAG ATGGGTGGTT ATAAAGCCCT GACAAAAGGC
CAAGTTGATG CCATGTCGGC GGTATTGATT GTCGAAAGTT ACTTCGAGAG TTTGTATTAA
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| Protein sequence | MSSQTVLGFD YGTKSIGIAI GQSLTGSANP LLSIKAVDGI PKWEEIGMLI EEWRPDLVVV
GLPLNMDGSE QEMTQRAKKF ANRISGRFGV KVETQDERLT TADAKTRLFE MGGYKALTKG
QVDAMSAVLI VESYFESLY
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