Gene Spea_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1131 
Symbol 
ID5661530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1368868 
End bp1369293 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content49% 
IMG OID641235683 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_001500993 
Protein GI157960959 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.111461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGATA AAAGCGTCTT AGGCTTTGAT TACGGCACAA AGAGTATCGG TATTGCTATA 
GGGCAAGAAC TCACCGCAAG CGCTAGACCA CTATTGTCGA TAAAGGCTGT AGACGGGATC 
CCTAGATGGG AAGAGATTGG CGCACTCATT ACCGAATGGA AACCCGATCT TGTAGTCGTT 
GGCCTACCAC TCAATATGGA TGGCACCGAG CAAGAGATGA CCCAAAGAGC ACGCAAGTTT 
GCCAATCGCA TAAGTGGTCG CTTCGGCGTA AAAGTCGAGA CTCAAGACGA ACGTCTCACC 
ACTGCAGACG CTAAAGCTAG GCTGTTTGAG ATGGGAGGAT ACAAGGCCCT GACTAAGGGG 
CAAGTTGATG CCATGTCTGC TGTACTGATT GTTGAAAGTT ACTTTGAAAA TCAGTACGGG 
GACTAA
 
Protein sequence
MGDKSVLGFD YGTKSIGIAI GQELTASARP LLSIKAVDGI PRWEEIGALI TEWKPDLVVV 
GLPLNMDGTE QEMTQRARKF ANRISGRFGV KVETQDERLT TADAKARLFE MGGYKALTKG 
QVDAMSAVLI VESYFENQYG D