| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2673 |
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| Symbol | |
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| ID | 4019190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3206624 |
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| End bp | 3207049 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956717 |
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| Product | Holliday junction resolvase-like protein |
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| Protein accession | YP_563675 |
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| Protein GI | 91794024 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000201914 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAATGA ATCAAACCGT GTTAGGTTTT GACTATGGCA CCAAGAGCAT AGGTGTCGCA
GTGGGGCAGA GCATAACCGC AAGCGCCAGC CCGTTATTGG CGTTAAAAGC GCAAGATGGC
ATCCCCAACT GGGATGAAAT TGAAAAGCTA ATAAAAGAAT GGCAACCGGA CTTAGTGGTT
GTCGGATTAC CGCTAAATAT GGACGGCACA GAGCAAGATA TCACCCAAAG AGCAAAGAAG
TTTGCCAATC GCATCAGTGG CCGCTTTGGG GTCAAAGTGC TCACCCAAGA TGAGCGTTTA
ACCACCGCAG ATGCCAAGGC GCGCTTGTTT GAACTCGGCG GCTACAAAGC GCTTACTAAA
GGGCAGGTCG ATGCCGTCTC TGCAGTGCTT ATCATAGAGA GTTATTTCGA AAATCAATAT
GATTGA
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| Protein sequence | MTMNQTVLGF DYGTKSIGVA VGQSITASAS PLLALKAQDG IPNWDEIEKL IKEWQPDLVV
VGLPLNMDGT EQDITQRAKK FANRISGRFG VKVLTQDERL TTADAKARLF ELGGYKALTK
GQVDAVSAVL IIESYFENQY D
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