Gene SYO3AOP1_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0474 
Symbol 
ID6331480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand- 
Start bp487424 
End bp487861 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content30% 
IMG OID642656763 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_001930669 
Protein GI188996418 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00800439 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTAGAA TTTTAGGTCT TGATATAGGA TTAAAAAGGA TTGGTGTTGC TGTAAGCGAT 
CCGTTCGGAG TTACAGCAAC GCCTCTTGAG TTTATTCTAA ACGACGAAAA AGTATTTGAA 
AAAATCAATG ATTTAATAAA AAATTATAAA ATCTCAAAAA TAGTTATTGG ACTACCATTA 
ACGCTAAAAG GTGAAGAAGG AGAGCAAGCA AGATATACAA AAGAGTTTGT CGAAAATCTA 
AAAAATCACA TTCCACAAGA TATAGAAATA ATCTTTGTAG ATGAAAGGTT TACATCATCC 
TTAGCAGAAA AAACATTATT ACAAACAAAA AAGAAAAACA AAAAAGAAAA AATAGACAGC 
TTGTCTGCAG TTTTTATACT TCAAACATAT CTTGACAGGT TATCTTTTAG CAATGAAGCG 
ACTAATTATA GCTATTAG
 
Protein sequence
MSRILGLDIG LKRIGVAVSD PFGVTATPLE FILNDEKVFE KINDLIKNYK ISKIVIGLPL 
TLKGEEGEQA RYTKEFVENL KNHIPQDIEI IFVDERFTSS LAEKTLLQTK KKNKKEKIDS 
LSAVFILQTY LDRLSFSNEA TNYSY