Gene Coch_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1395 
Symbol 
ID8367827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1640900 
End bp1641331 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content44% 
IMG OID644983823 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_003141502 
Protein GI256820223 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTCT TAGCTATAGA CTACGGAACC AAACGCACAG GTATTGCTGT AACCGACCCC 
CTGCAAATCA TCGCTTCGGG GCTTTGCACA GTAGAAACTT CTACCCTACT GGCTTTCCTA 
AAACAATACA CTGCCGAGGA AGCCGTAGAA GCCTTTGTGA TTGGGCAACC TAAACGAATG 
AACAGTGAGG ATTCCAGCGT AGAGGCTGAG ATACAAAAGT TTATCAGTAA GTTACAACAG 
GAGTTTCCAG AGATACCTAT CCACCGTCAA GACGAGCGGT TTACCTCCAA ACTTGCTTTC 
CAAACAATGA TTGATAGCGG ACTAAAAAAG AAACAACGCC AGAACAAAGC GCTGATAGAT 
GAAATAAGTG CCACTATTAT CTTACAAGAA TTTCTTTCAG GGAGAGCTAA TGAGTGGTCA 
AGCAAAAGAT AA
 
Protein sequence
MRLLAIDYGT KRTGIAVTDP LQIIASGLCT VETSTLLAFL KQYTAEEAVE AFVIGQPKRM 
NSEDSSVEAE IQKFISKLQQ EFPEIPIHRQ DERFTSKLAF QTMIDSGLKK KQRQNKALID 
EISATIILQE FLSGRANEWS SKR