Gene Dbac_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1790 
Symbol 
ID8377462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp2041801 
End bp2042202 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content58% 
IMG OID645001018 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_003158297 
Protein GI256829569 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00751815 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAC TCGGCATCGA TTACGGGCAA AAAAGAATCG GATTGGCCAT GGCCCGGCAA 
GGCATGGCCT TTCCGTTCAA AACCCTGGAC AAAAGCACCC GCGACAAGCT CTTCGCCGAT 
CTCATGAGCA TCATCGAGAG CGAAGGCGTG GAGGCCATCG TCCTGGGCCT GCCCCTTGAC 
ATGAACGGGG ATGAGACCCT GACCACCCGG CAGGTGCTGA ACTTTCGCGA CAGCCTGGCC 
AGGCGAACGG AGCTTCCCAT CCACCTGGTC AACGAGGCCC TGACCTCCTT TGATGCCCGG 
CAGCGTCTGC GGGAAGCCGG CGTGCCTGAA CGAAAGCACA AGGAAATGCT CGATCAGATG 
GCCGCGGTCT GCATTCTGGA AACGTACCTG GAAAATTCAT GA
 
Protein sequence
MKILGIDYGQ KRIGLAMARQ GMAFPFKTLD KSTRDKLFAD LMSIIESEGV EAIVLGLPLD 
MNGDETLTTR QVLNFRDSLA RRTELPIHLV NEALTSFDAR QRLREAGVPE RKHKEMLDQM 
AAVCILETYL ENS