| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0376 |
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| Symbol | |
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| ID | 8709787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 404582 |
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| End bp | 405040 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482492 |
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| Product | RNAse YqgF |
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| Protein accession | YP_003373626 |
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| Protein GI | 283782872 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTGGT TAGGTATTGA TTTAGGTGAC GCAAGGGTCG GACTTGCACT TTCCGACCCT
GGTCTCACCT TTGCACATCC TATTGGTAAT GTGCAAGTGT TTGGAGATTC CTTCCATGCT
ATAGATGAAG TGCTTGAAGT TATTGAAGAT AACAATGTAG AAAAAGTTGT TATAGGCTTG
CCTTTGCAAC TTGATGGCAC TGAAGGAAAA TCTGCTAAAA AAGCTCTGCG CTGGGGGAAG
AATCTAATAA AACGCATGCA AATATTGCAT GACGAAAAAG ATTGGGCGTT GGATTATATG
CCAGAAGTAG TTTGGAAAGA TGAGCGTTTG ACAACAGTAA GTGCTCATCG TCAGCTTTTG
CAAGCGGATC TTTCTACTAA AAAGCATCGT CCAATGGTAG ATCAGCAGTC GGCAGTGTTG
ATTTTGCAGT CTGCGCTTGA CGCAAATAAT GCAGAGTAG
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| Protein sequence | MVWLGIDLGD ARVGLALSDP GLTFAHPIGN VQVFGDSFHA IDEVLEVIED NNVEKVVIGL
PLQLDGTEGK SAKKALRWGK NLIKRMQILH DEKDWALDYM PEVVWKDERL TTVSAHRQLL
QADLSTKKHR PMVDQQSAVL ILQSALDANN AE
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