More than 300 homologs were found in PanDaTox collection
for query gene Amir_5264 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_5264  Holliday junction resolvase YqgF  100 
 
 		 170 aa  325  3e-88  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_15280  conserved hypothetical protein TIGR00250  70.21 
 
 		 154 aa  184  4e-46  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0307172  normal  0.652486 
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  58.78 
 
 		 175 aa  167  7e-41  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.454353 
 
 
-
 
NC_009953  Sare_1820  Holliday junction resolvase YqgF  63.01 
 
 		 153 aa  166  1e-40  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0000610168 
 
 
-
 
NC_009380  Strop_1829  Holliday junction resolvase YqgF  63.01 
 
 		 153 aa  165  2.9999999999999998e-40  Salinispora tropica CNB-440  Bacteria  normal  0.0551936  normal  1 
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  60.81 
 
 		 175 aa  165  4e-40  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  60.54 
 
 		 169 aa  164  5.9999999999999996e-40  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.0472019 
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  60.54 
 
 		 169 aa  164  6.9999999999999995e-40  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  60.54 
 
 		 169 aa  164  6.9999999999999995e-40  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.345644 
 
 
-
 
NC_009565  TBFG_12575  Holliday junction resolvase-like protein  63.76 
 
 		 170 aa  154  5.0000000000000005e-37  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00396279  normal  0.126571 
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  54.14 
 
 		 202 aa  153  1e-36  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal  1 
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  56.55 
 
 		 151 aa  145  2.0000000000000003e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal  1 
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  59.85 
 
 		 163 aa  143  1e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal  1 
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  55.32 
 
 		 188 aa  140  7e-33  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  53.73 
 
 		 222 aa  131  3e-30  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  55.22 
 
 		 163 aa  130  6.999999999999999e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  52.7 
 
 		 161 aa  129  3e-29  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_013441  Gbro_2321  Holliday junction resolvase YqgF  54.01 
 
 		 143 aa  127  6e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_3296  Holliday junction resolvase YqgF  58.71 
 
 		 169 aa  127  1.0000000000000001e-28  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000134676  normal  0.0641237 
 
 
-
 
NC_008699  Noca_2408  Holliday junction resolvase-like protein  50.62 
 
 		 156 aa  126  2.0000000000000002e-28  Nocardioides sp. JS614  Bacteria  normal  0.332292  n/a   
 
 
-
 
NC_014165  Tbis_2046  Holliday junction resolvase YqgF  58.82 
 
 		 163 aa  123  1e-27  Thermobispora bispora DSM 43833  Bacteria  normal  0.0425259  normal  1 
 
 
-
 
NC_013510  Tcur_2136  Holliday junction resolvase YqgF  56.45 
 
 		 152 aa  116  9.999999999999999e-26  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000271405  n/a   
 
 
-
 
NC_008578  Acel_1329  Holliday junction resolvase YqgF  53.68 
 
 		 173 aa  117  9.999999999999999e-26  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0531797  normal  0.27422 
 
 
-
 
NC_008541  Arth_2277  Holliday junction resolvase YqgF  51.77 
 
 		 199 aa  116  1.9999999999999998e-25  Arthrobacter sp. FB24  Bacteria  normal  0.117352  n/a   
 
 
-
 
NC_013131  Caci_2379  Holliday junction resolvase-like protein  52.94 
 
 		 171 aa  115  3e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_1819  Holliday junction resolvase YqgF  51.03 
 
 		 190 aa  112  2.0000000000000002e-24  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0503115  normal  1 
 
 
-
 
NC_013174  Jden_1350  Holliday junction resolvase YqgF  48.05 
 
 		 167 aa  109  2.0000000000000002e-23  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_16350  conserved hypothetical protein TIGR00250  44.89 
 
 		 181 aa  108  4.0000000000000004e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_17700  conserved hypothetical protein TIGR00250  54 
 
 		 167 aa  106  1e-22  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00726332  normal  0.269027 
 
 
-
 
NC_011886  Achl_2014  Holliday junction resolvase YqgF  43.04 
 
 		 207 aa  106  2e-22  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000330035 
 
 
-
 
NC_013530  Xcel_1690  Holliday junction resolvase YqgF  50.71 
 
 		 184 aa  105  3e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.480738  n/a   
 
 
-
 
NC_014210  Ndas_3074  Holliday junction resolvase YqgF  47.18 
 
 		 161 aa  103  1e-21  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.459764 
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  42.25 
 
 		 146 aa  99.8  2e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  46.27 
 
 		 140 aa  97.4  8e-20  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_004116  SAG2090  Holliday junction resolvase-like protein  42.96 
 
 		 136 aa  97.1  9e-20  Streptococcus agalactiae 2603V/R  Bacteria  hitchhiker  0.000724166  n/a   
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  39.72 
 
 		 158 aa  96.3  2e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  46.27 
 
 		 142 aa  95.5  3e-19  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal  1 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  37.96 
 
 		 139 aa  94.4  7e-19  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  40.88 
 
 		 137 aa  94  8e-19  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  40.88 
 
 		 137 aa  94  8e-19  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  40.88 
 
 		 137 aa  94  8e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  40.88 
 
 		 137 aa  94  8e-19  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  40.88 
 
 		 137 aa  94  8e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  40.88 
 
 		 137 aa  94  8e-19  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_009664  Krad_3031  Holliday junction resolvase YqgF  50 
 
 		 188 aa  94  9e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  36.11 
 
 		 147 aa  94  9e-19  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_013169  Ksed_12520  conserved hypothetical protein TIGR00250  50.74 
 
 		 161 aa  93.2  1e-18  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.101388  normal  0.418633 
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  36.23 
 
 		 141 aa  93.2  1e-18  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  43.48 
 
 		 143 aa  93.6  1e-18  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  42.34 
 
 		 138 aa  93.2  2e-18  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  40.88 
 
 		 137 aa  92.8  2e-18  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_008531  LEUM_0558  Holliday junction resolvase-like protein  39.01 
 
 		 143 aa  92.8  2e-18  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  40.15 
 
 		 137 aa  92  3e-18  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal  1 
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  41.61 
 
 		 137 aa  92.4  3e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  39.1 
 
 		 141 aa  92  4e-18  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal  1 
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  40.82 
 
 		 146 aa  90.9  8e-18  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  41.3 
 
 		 146 aa  90.9  9e-18  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  36.96 
 
 		 139 aa  90.5  9e-18  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  40.15 
 
 		 137 aa  90.5  1e-17  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  39.42 
 
 		 137 aa  90.1  1e-17  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_007802  Jann_2181  Holliday junction resolvase YqgF  43.57 
 
 		 145 aa  90.1  1e-17  Jannaschia sp. CCS1  Bacteria  normal  0.659798  normal  1 
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  42.34 
 
 		 138 aa  90.1  1e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  36.23 
 
 		 137 aa  90.1  1e-17  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  40.44 
 
 		 139 aa  90.5  1e-17  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  38.69 
 
 		 141 aa  89.7  2e-17  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal  1 
 
 
-
 
NC_009632  SaurJH1_1707  Holliday junction resolvase-like protein  38.06 
 
 		 142 aa  89.7  2e-17  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.24342  n/a   
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  39.71 
 
 		 144 aa  89.7  2e-17  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_007493  RSP_2684  Holliday junction resolvase-like protein  44.2 
 
 		 160 aa  89.7  2e-17  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.173322  n/a   
 
 
-
 
NC_009049  Rsph17029_1342  Holliday junction resolvase-like protein  44.2 
 
 		 160 aa  89.7  2e-17  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00888056  normal  0.184568 
 
 
-
 
NC_009487  SaurJH9_1673  Holliday junction resolvase-like protein  38.06 
 
 		 142 aa  89.7  2e-17  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.514842  n/a   
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  39.58 
 
 		 157 aa  89  3e-17  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013203  Apar_0458  Holliday junction resolvase YqgF  38.41 
 
 		 140 aa  89  3e-17  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008528  OEOE_1165  RNase H-like ribonuclease  37.86 
 
 		 144 aa  89  3e-17  Oenococcus oeni PSU-1  Bacteria  normal  0.345189  n/a   
 
 
-
 
NC_013721  HMPREF0424_0376  RNAse YqgF  39.04 
 
 		 152 aa  88.6  4e-17  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  41.43 
 
 		 143 aa  88.2  4e-17  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  42.03 
 
 		 153 aa  88.2  5e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  38.06 
 
 		 141 aa  88.2  5e-17  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  41.3 
 
 		 160 aa  87.8  6e-17  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal  1 
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  41.61 
 
 		 163 aa  87  1e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  41.73 
 
 		 158 aa  86.7  1e-16  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal  1 
 
 
-
 
NC_002976  SERP1180  Holliday junction resolvase-like protein  36.57 
 
 		 142 aa  86.3  2e-16  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  38.81 
 
 		 142 aa  85.9  2e-16  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_009720  Xaut_3922  Holliday junction resolvase YqgF  41.77 
 
 		 176 aa  86.3  2e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_4344  Holliday junction resolvase YqgF  45.45 
 
 		 168 aa  85.9  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.892789  normal  0.367855 
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  39.29 
 
 		 182 aa  85.9  3e-16  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  35.77 
 
 		 139 aa  85.9  3e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.0000233904 
 
 
-
 
NC_011145  AnaeK_2633  Holliday junction resolvase-like protein  40.88 
 
 		 137 aa  85.1  4e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.854397  n/a   
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  36.88 
 
 		 142 aa  85.1  5e-16  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  41.61 
 
 		 137 aa  84.3  8e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2727  Holliday junction resolvase-like protein  40.88 
 
 		 137 aa  84.3  8e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_3023  Holliday junction resolvase-like protein  39.86 
 
 		 160 aa  84  0.000000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.438725  normal  0.394583 
 
 
-
 
NC_009952  Dshi_1064  Holliday junction resolvase-like protein  40.14 
 
 		 163 aa  84  0.000000000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.282287  normal  1 
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  32.09 
 
 		 142 aa  83.2  0.000000000000002  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  34.31 
 
 		 145 aa  83.2  0.000000000000002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_013165  Shel_07810  conserved hypothetical protein TIGR00250  37.23 
 
 		 138 aa  82.8  0.000000000000002  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  0.0182311 
 
 
-
 
NC_012803  Mlut_12710  putative Holliday junction resolvase  50.65 
 
 		 189 aa  83.2  0.000000000000002  Micrococcus luteus NCTC 2665  Bacteria  normal  0.84059  n/a   
 
 
-
 
NC_007333  Tfu_2069  Holliday junction resolvase-like protein  48.63 
 
 		 159 aa  82  0.000000000000003  Thermobifida fusca YX  Bacteria  normal  0.0705886  n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  35.51 
 
 		 140 aa  82.4  0.000000000000003  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  36.57 
 
 		 149 aa  82.4  0.000000000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  37.31 
 
 		 151 aa  82  0.000000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal  1 
 
 
-
 
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