Gene Amir_5264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5264 
Symbol 
ID8329466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6261091 
End bp6261603 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content73% 
IMG OID644945703 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_003102931 
Protein GI256379271 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCAGCG GTGACACCCC CGGCGTCGAC GATCCCGGCC TCGGCAGGAG GCTGGGCGTC 
GACGTCGGGG CGGTCCGGGT CGGGGTCGCG CTGAGCGATC CGGGTGCCTT TCTGGCGACC 
CCGCTGGTTA CCCTGTCCCG TGACGAGAAG AACGGCCGGG ACCTGGACGA CCTGGTCGGT 
CTGGCAGCCG AGCACGACGT GGTGGAAGTC GTGGTCGGCC TGCCCCGGAC CCTCGCGGGC 
AAGCACGGAC CGGCGGCTCA GGCCGCCACG GCGTACGCGG CGGCGCTCGC CGAGCGGGTC 
GCACCTCTCC CGGTGCGGCT CACCGACGAG CGGCTGACCA CCGTGACGGC GAGCCGCGTG 
CTGGCTCAGC GGGGGGTGCG GGGCAAGAAG CAACGTGCCG TCGTTGACCA GGCTGCCGCT 
GTCGAGATCC TGCAGTCCTG GCTCGACGCA CGAGCGCGAC ACGTGGCGAG GGCCGCCTCC 
GAGCGGTCAC CTGGAGCGAA GGACGGCTCG TGA
 
Protein sequence
MSSGDTPGVD DPGLGRRLGV DVGAVRVGVA LSDPGAFLAT PLVTLSRDEK NGRDLDDLVG 
LAAEHDVVEV VVGLPRTLAG KHGPAAQAAT AYAAALAERV APLPVRLTDE RLTTVTASRV 
LAQRGVRGKK QRAVVDQAAA VEILQSWLDA RARHVARAAS ERSPGAKDGS