| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0458 |
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| Symbol | |
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| ID | 8413307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 528333 |
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| End bp | 528755 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022026 |
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| Product | Holliday junction resolvase YqgF |
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| Protein accession | YP_003179480 |
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| Protein GI | 257784263 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCGTGTTT TAGCTTTAGA TATTGGTGAA GTTCGCATCG GGGTTGCTGT AAGTGACCCC
GATGGTGCTA TTGCGTCACC TGTTTGTGTA CTTCCTGCAC AAGAGGTGCT CTCGCATGCG
CGCACGTTTA AAACCGTGCT TGAAGATTGG GAACCAGAGC TTCTTTTGTG CGGTCGTCCT
AAGACGCTCG CCGGTGAAGA TGGCCCACAG GCCCAAAAAA TTACCGTTCA AGCTGAGCAA
ATTGCGAAGA ACTGCCAACT TCCATTAGAA TTTACTGATG AAAGACTCTC TTCCGCGGAA
GCGAAGAAGA TTCTTCGAGC GCAAGGTTTA TCTGAGAAAG CTATGCGTGG GAAAGTTGAC
ATGGTTGCTG CTTCGCTCTT TTTGCAATCG TGGCTTGATG CACAGATGAA TAAGGGAGAC
TAA
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| Protein sequence | MRVLALDIGE VRIGVAVSDP DGAIASPVCV LPAQEVLSHA RTFKTVLEDW EPELLLCGRP
KTLAGEDGPQ AQKITVQAEQ IAKNCQLPLE FTDERLSSAE AKKILRAQGL SEKAMRGKVD
MVAASLFLQS WLDAQMNKGD
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