More than 300 homologs were found in PanDaTox collection
for query gene Shel_07810 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_07810  conserved hypothetical protein TIGR00250  100 
 
 
138 aa  274  3e-73  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0182311 
 
 
-
 
NC_013203  Apar_0458  Holliday junction resolvase YqgF  66.67 
 
 
140 aa  181  2.0000000000000003e-45  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  63.7 
 
 
138 aa  180  7e-45  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013170  Ccur_05110  conserved hypothetical protein TIGR00250  60.74 
 
 
140 aa  154  4e-37  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  39.26 
 
 
142 aa  103  8e-22  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal 
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  38.81 
 
 
146 aa  103  1e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  38.81 
 
 
141 aa  102  2e-21  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  41.22 
 
 
151 aa  100  7e-21  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  42.11 
 
 
137 aa  100  1e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.52249 
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  40.91 
 
 
150 aa  95.1  3e-19  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  39.85 
 
 
141 aa  95.1  3e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  38.35 
 
 
140 aa  93.6  8e-19  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_011145  AnaeK_2633  Holliday junction resolvase-like protein  41.35 
 
 
137 aa  92.8  1e-18  Anaeromyxobacter sp. K  Bacteria  normal  0.854397  n/a   
 
 
-
 
NC_011891  A2cp1_2727  Holliday junction resolvase-like protein  40.74 
 
 
137 aa  92.4  2e-18  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  38.93 
 
 
139 aa  92  3e-18  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  38.93 
 
 
139 aa  92  3e-18  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0212683 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  33.09 
 
 
139 aa  90.1  8e-18  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_013525  Tter_0088  Holliday junction resolvase YqgF  39.72 
 
 
149 aa  89.4  1e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  36.15 
 
 
151 aa  89.7  1e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  40 
 
 
137 aa  89.7  1e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_2194  Holliday junction resolvase-like protein  36.3 
 
 
141 aa  90.1  1e-17  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.401443  n/a   
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  39.29 
 
 
151 aa  89.4  1e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal 
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  33.09 
 
 
140 aa  89.4  2e-17  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  37.4 
 
 
158 aa  89  2e-17  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2220  Holliday junction resolvase-like protein  36.3 
 
 
141 aa  88.6  3e-17  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.0000000031992  n/a   
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  38.35 
 
 
146 aa  87.8  5e-17  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  33.85 
 
 
149 aa  87.4  5e-17  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  38.57 
 
 
161 aa  86.7  1e-16  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_009953  Sare_1820  Holliday junction resolvase YqgF  38.13 
 
 
153 aa  86.7  1e-16  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0000610168 
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  37.68 
 
 
143 aa  86.7  1e-16  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  36.36 
 
 
149 aa  85.5  2e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_009380  Strop_1829  Holliday junction resolvase YqgF  37.41 
 
 
153 aa  85.5  2e-16  Salinispora tropica CNB-440  Bacteria  normal  0.0551936  normal 
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  34.53 
 
 
139 aa  85.9  2e-16  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
NC_008578  Acel_1329  Holliday junction resolvase YqgF  39.85 
 
 
173 aa  85.9  2e-16  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0531797  normal  0.27422 
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  37.96 
 
 
145 aa  85.9  2e-16  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  36.64 
 
 
157 aa  85.1  3e-16  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  35.34 
 
 
137 aa  84.7  4e-16  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  35.34 
 
 
137 aa  84.7  4e-16  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  32.35 
 
 
143 aa  84  6e-16  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_0558  Holliday junction resolvase-like protein  36.88 
 
 
143 aa  84  6e-16  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4344  Holliday junction resolvase YqgF  41.35 
 
 
168 aa  84  6e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.892789  normal  0.367855 
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  35.34 
 
 
158 aa  84  7e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  41.67 
 
 
158 aa  83.6  9e-16  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal 
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  35.29 
 
 
142 aa  83.6  9e-16  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  37.31 
 
 
146 aa  83.2  0.000000000000001  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  40.6 
 
 
163 aa  82.4  0.000000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0915  Holliday junction resolvase YqgF  35.56 
 
 
141 aa  82.4  0.000000000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.242003  n/a   
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  36.36 
 
 
222 aa  82  0.000000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  36.76 
 
 
175 aa  82.4  0.000000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  33.33 
 
 
141 aa  82.4  0.000000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.140554 
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  35.51 
 
 
141 aa  81.3  0.000000000000004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  30.6 
 
 
137 aa  80.5  0.000000000000006  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  36.96 
 
 
175 aa  80.9  0.000000000000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.454353 
 
 
-
 
NC_013159  Svir_15280  conserved hypothetical protein TIGR00250  41.48 
 
 
154 aa  80.9  0.000000000000006  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0307172  normal  0.652486 
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  36.36 
 
 
146 aa  79.7  0.00000000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_0199  Holliday junction resolvase YqgF  36.15 
 
 
144 aa  80.1  0.00000000000001  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.102311  n/a   
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  35.07 
 
 
160 aa  79.7  0.00000000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal 
 
 
-
 
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  33.8 
 
 
147 aa  79.3  0.00000000000001  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_009952  Dshi_1064  Holliday junction resolvase-like protein  37.88 
 
 
163 aa  80.1  0.00000000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.282287  normal 
 
 
-
 
NC_009049  Rsph17029_1342  Holliday junction resolvase-like protein  35.61 
 
 
160 aa  79  0.00000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00888056  normal  0.184568 
 
 
-
 
NC_007493  RSP_2684  Holliday junction resolvase-like protein  35.61 
 
 
160 aa  79  0.00000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.173322  n/a   
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  37.23 
 
 
142 aa  79  0.00000000000002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_08311  endonuclease  36.15 
 
 
144 aa  78.6  0.00000000000003  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.0380749  normal  0.23212 
 
 
-
 
NC_010505  Mrad2831_0475  Holliday junction resolvase YqgF  38.35 
 
 
170 aa  78.6  0.00000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.437798  normal  0.0955854 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  39.71 
 
 
153 aa  78.6  0.00000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  36.5 
 
 
169 aa  78.2  0.00000000000003  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008528  OEOE_1165  RNase H-like ribonuclease  34.51 
 
 
144 aa  78.6  0.00000000000003  Oenococcus oeni PSU-1  Bacteria  normal  0.345189  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  36.5 
 
 
169 aa  78.2  0.00000000000003  Mycobacterium sp. KMS  Bacteria  normal  normal  0.345644 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  32.85 
 
 
138 aa  78.2  0.00000000000004  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_002950  PG2202  Holliday junction resolvase-like protein  35.51 
 
 
138 aa  77.8  0.00000000000005  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  37.59 
 
 
141 aa  77.4  0.00000000000005  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal 
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  36.5 
 
 
169 aa  77  0.00000000000008  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0472019 
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  34.53 
 
 
139 aa  76.3  0.0000000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000233904 
 
 
-
 
NC_006368  lpp0637  Holliday junction resolvase-like protein  32.33 
 
 
139 aa  76.3  0.0000000000001  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  32.85 
 
 
138 aa  76.6  0.0000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  30.6 
 
 
142 aa  76.6  0.0000000000001  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_007643  Rru_A3178  Holliday junction resolvase YqgF  37.96 
 
 
161 aa  76.3  0.0000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.825708  n/a   
 
 
-
 
NC_013093  Amir_5264  Holliday junction resolvase YqgF  37.5 
 
 
170 aa  76.3  0.0000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG2090  Holliday junction resolvase-like protein  33.08 
 
 
136 aa  75.9  0.0000000000002  Streptococcus agalactiae 2603V/R  Bacteria  hitchhiker  0.000724166  n/a   
 
 
-
 
NC_011886  Achl_2014  Holliday junction resolvase YqgF  36.76 
 
 
207 aa  75.9  0.0000000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000330035 
 
 
-
 
NC_006369  lpl0621  Holliday junction resolvase-like protein  32.33 
 
 
139 aa  76.3  0.0000000000002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  34.85 
 
 
144 aa  75.5  0.0000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  36.76 
 
 
182 aa  75.9  0.0000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_009654  Mmwyl1_0540  Holliday junction resolvase YqgF  33.08 
 
 
156 aa  75.9  0.0000000000002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2277  Holliday junction resolvase YqgF  37.5 
 
 
199 aa  75.9  0.0000000000002  Arthrobacter sp. FB24  Bacteria  normal  0.117352  n/a   
 
 
-
 
NC_010725  Mpop_3519  Holliday junction resolvase YqgF  39.85 
 
 
165 aa  74.7  0.0000000000004  Methylobacterium populi BJ001  Bacteria  normal  0.432695  normal 
 
 
-
 
NC_010681  Bphyt_0869  Holliday junction resolvase-like protein  36.36 
 
 
146 aa  74.3  0.0000000000005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0747835 
 
 
-
 
NC_008347  Mmar10_1708  Holliday junction resolvase YqgF  33.59 
 
 
151 aa  74.3  0.0000000000005  Maricaulis maris MCS10  Bacteria  normal  normal  0.180151 
 
 
-
 
NC_010172  Mext_3319  Holliday junction resolvase YqgF  39.85 
 
 
160 aa  74.3  0.0000000000006  Methylobacterium extorquens PA1  Bacteria  normal  0.587532  normal  0.657687 
 
 
-
 
NC_007912  Sde_3638  Holliday junction resolvase-like protein  32.33 
 
 
142 aa  74.3  0.0000000000006  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3643  Holliday junction resolvase YqgF  39.85 
 
 
165 aa  73.9  0.0000000000007  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.724014 
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  39.85 
 
 
163 aa  73.9  0.0000000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  37.78 
 
 
188 aa  73.9  0.0000000000007  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_009636  Smed_0941  Holliday junction resolvase-like protein  34.35 
 
 
165 aa  73.6  0.0000000000008  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.22726 
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  32.85 
 
 
163 aa  73.2  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal 
 
 
-
 
NC_011989  Avi_1768  Holliday junction resolvase-like protein  34.35 
 
 
158 aa  73.2  0.000000000001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1361  Holliday junction resolvase YqgF  34.38 
 
 
160 aa  73.2  0.000000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  35.04 
 
 
137 aa  72.4  0.000000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  35.82 
 
 
202 aa  72.8  0.000000000002  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal 
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  31.91 
 
 
137 aa  72.4  0.000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>