Gene Daud_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0915 
Symbol 
ID6026879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp977337 
End bp977762 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content60% 
IMG OID641593727 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_001717060 
Protein GI169831078 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.242003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGA TGGGACTCGA TATCGGCGAC CGGAGGATCG GGGTGGCCTT AACTGATGAA 
AACGGGGTTG CGGCCTACCC CCTGGAGGTG TTGGAGCGGA CCTCGCCGGA AAAGGATCTG 
CGCCGGATCA CCGAGATCAT TGACCAGTAC GGGGTCGAGC GGGTGGTGGC CGGACTGCCG 
AAAACACTCT CGGGGCAAAT CGGACCCCAG GGCGATAAGG TGTTGTCTTT TTTGGATAAG 
CTCCGGGTGC GTTCGACGGT GCCCGTGATC ACCTGGGACG AACGGTTAAC AACCGCGGAG 
GTGGAAAAAC TACTGGTTAG TGCCGATCTG GGCCGCCGCC GGCGCCGCAA GGTGGTGGAC 
AAACTCGCGG CGACGCTGAT CCTGAATTCC TATCTCAATT CCCGGAAATC AGGCCGTAAC 
ACTTGA
 
Protein sequence
MRLMGLDIGD RRIGVALTDE NGVAAYPLEV LERTSPEKDL RRITEIIDQY GVERVVAGLP 
KTLSGQIGPQ GDKVLSFLDK LRVRSTVPVI TWDERLTTAE VEKLLVSADL GRRRRRKVVD 
KLAATLILNS YLNSRKSGRN T