Gene NATL1_08311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_08311 
Symbol 
ID4781042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp763671 
End bp764105 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content34% 
IMG OID640084106 
Productendonuclease 
Protein accessionYP_001014654 
Protein GI124025538 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0380749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.23212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAGC CAAAACCCTG TTCAGTTTTG AGTCTTGATA TTGGAGATAA AAGGATTGGT 
ATTGCAGGTT GTGATCCACT TGGAATATCA ATAACTCATC TCCCCGCAAT TTTTAGAGAT
AGCTTTGAAA AAGATCTAAA AGAATTCGAG AAAATATGTT TTGACCGAAG AGTTGAAGGT
CTCATTTGTG GTAATCCTCT TGATATGAAT GGCATGGAAA CTAAACAATC TATTCGATGT
AAAAAATATG GGATTAAATT AGCTAAATGT TTAAAACTTC CTTTGGCTTT TATCAATGAA
CATTGTTCAA CCTTAGAGGC TAAAGAAAAG TTCTCTTTAA AAAATGACAA GACTGGAAGA
CTAGATAGTG CAGCTGCCGC TATACTTTTA CAACAATGGC TTATTGAGGG ACCTGATCTG
GATGACTCAA ATTAA
 
Protein sequence
MIQPKPCSVL SLDIGDKRIG IAGCDPLGIS ITHLPAIFRD SFEKDLKEFE KICFDRRVEG 
LICGNPLDMN GMETKQSIRC KKYGIKLAKC LKLPLAFINE HCSTLEAKEK FSLKNDKTGR
LDSAAAAILL QQWLIEGPDL DDSN