Gene PMN2A_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0199 
Symbol 
ID3605569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp751302 
End bp751736 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content35% 
IMG OID637687055 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_291394 
Protein GI72382039 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.102311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAGC CAAAACCCTG TTCAGTTTTG AGTCTTGATA TTGGAGATAA AAGGATTGGT 
ATTGCAGGTT GTGATCCACT TGGAATATCA ATAACTCATC TCCCCGCAAT TTTTAGAGAT 
AGCTTTGAAA AAGATCTAAA AGAATTCGAG AAAATATGTT TTGACCGAAG AGTTGAAGGG 
CTCATTTGTG GTAATCCTCT TGATATGAAT GGCATGGAAA CTAAACAATC TATTCGATGT 
AAAAAATATG GGATTAAATT AGCTAAATGT TTAAAACTTC CTTTGGCTTT TATCAATGAA 
CATTGTTCAA CCGTAGAGGC TAAAGAAAAG TTCTCTTTAA AAAATGACAA GACTGGAAGA 
ATAGATAGTG CAGCTGCCGC TATACTTTTA CAACAATGGC TTATTGAGGG ACCTGATCTG 
GATGACTCAA ATTAA
 
Protein sequence
MIQPKPCSVL SLDIGDKRIG IAGCDPLGIS ITHLPAIFRD SFEKDLKEFE KICFDRRVEG 
LICGNPLDMN GMETKQSIRC KKYGIKLAKC LKLPLAFINE HCSTVEAKEK FSLKNDKTGR 
IDSAAAAILL QQWLIEGPDL DDSN