Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1329 |
Symbol | |
ID | 4486382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1479561 |
End bp | 1480082 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639730109 |
Product | Holliday junction resolvase YqgF |
Protein accession | YP_873087 |
Protein GI | 117928536 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0531797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.27422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGACA CAGCCGTGCG ACCGGGAGTG CGGATCGGCG TCGACGTCGG CACGGTACGG ATCGGTGTCG CGGTCAGCGA TCCCGACGGG CGGCTCGCCG TACCGGCCGA GACACTGCCG CGTGACGCTT CCGGAGCCGG TGAGCTGCGC CGCCTTGCCC AGCTCGTCGA GGAGCGCGGC GCTGTCGAGG TTGTCGTCGG CCTGCCGGTC TCGCTCCGCG GTACCGCGGG TGCCGCAGCC CGGGACATTG CCGGGTACGC CCGCCGGCTG GCGACAGCCG TGCACCCGGT GCCGGTCCGG CTGGTCGACG AGCGGTTCAC CACGGTGCAC GCCGACCGGC GGCTGCAATC GGCTGGACTC GCCGGCCGGC AGCGGCGGGC GGTTGTGGAT CAGCTTGCCG CCGCGATCCT CCTGCAGGAC GCATTGGACG CCGAACGCGC CACCGGCCGG CCGCCCGGCC GGCTGGTCAC CCCCGCCGAC CCGGACGACA CCGCCGCGGC TCGGCGCCGG GAGGCAGGGT GA
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Protein sequence | MGDTAVRPGV RIGVDVGTVR IGVAVSDPDG RLAVPAETLP RDASGAGELR RLAQLVEERG AVEVVVGLPV SLRGTAGAAA RDIAGYARRL ATAVHPVPVR LVDERFTTVH ADRRLQSAGL AGRQRRAVVD QLAAAILLQD ALDAERATGR PPGRLVTPAD PDDTAAARRR EAG
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