Gene Acel_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1329 
Symbol 
ID4486382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1479561 
End bp1480082 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content75% 
IMG OID639730109 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_873087 
Protein GI117928536 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0531797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.27422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGACA CAGCCGTGCG ACCGGGAGTG CGGATCGGCG TCGACGTCGG CACGGTACGG 
ATCGGTGTCG CGGTCAGCGA TCCCGACGGG CGGCTCGCCG TACCGGCCGA GACACTGCCG
CGTGACGCTT CCGGAGCCGG TGAGCTGCGC CGCCTTGCCC AGCTCGTCGA GGAGCGCGGC
GCTGTCGAGG TTGTCGTCGG CCTGCCGGTC TCGCTCCGCG GTACCGCGGG TGCCGCAGCC
CGGGACATTG CCGGGTACGC CCGCCGGCTG GCGACAGCCG TGCACCCGGT GCCGGTCCGG
CTGGTCGACG AGCGGTTCAC CACGGTGCAC GCCGACCGGC GGCTGCAATC GGCTGGACTC
GCCGGCCGGC AGCGGCGGGC GGTTGTGGAT CAGCTTGCCG CCGCGATCCT CCTGCAGGAC
GCATTGGACG CCGAACGCGC CACCGGCCGG CCGCCCGGCC GGCTGGTCAC CCCCGCCGAC
CCGGACGACA CCGCCGCGGC TCGGCGCCGG GAGGCAGGGT GA
 
Protein sequence
MGDTAVRPGV RIGVDVGTVR IGVAVSDPDG RLAVPAETLP RDASGAGELR RLAQLVEERG 
AVEVVVGLPV SLRGTAGAAA RDIAGYARRL ATAVHPVPVR LVDERFTTVH ADRRLQSAGL
AGRQRRAVVD QLAAAILLQD ALDAERATGR PPGRLVTPAD PDDTAAARRR EAG