291 homologs were found in PanDaTox collection
for query gene Xcel_1690 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_1690  Holliday junction resolvase YqgF  100 
 
 
184 aa  346  1e-94  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.480738  n/a   
 
 
-
 
NC_014151  Cfla_1819  Holliday junction resolvase YqgF  61.15 
 
 
190 aa  175  3e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0503115  normal 
 
 
-
 
NC_013521  Sked_17700  conserved hypothetical protein TIGR00250  63.12 
 
 
167 aa  164  5.9999999999999996e-40  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00726332  normal  0.269027 
 
 
-
 
NC_013172  Bfae_16350  conserved hypothetical protein TIGR00250  56.4 
 
 
181 aa  152  2e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  54.61 
 
 
163 aa  149  2e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal 
 
 
-
 
NC_013174  Jden_1350  Holliday junction resolvase YqgF  49.7 
 
 
167 aa  145  4.0000000000000006e-34  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2408  Holliday junction resolvase-like protein  56.13 
 
 
156 aa  140  9.999999999999999e-33  Nocardioides sp. JS614  Bacteria  normal  0.332292  n/a   
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  55.33 
 
 
163 aa  138  4.999999999999999e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  49.32 
 
 
151 aa  134  8e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal 
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  52.86 
 
 
188 aa  134  9.999999999999999e-31  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_008578  Acel_1329  Holliday junction resolvase YqgF  52.9 
 
 
173 aa  133  1.9999999999999998e-30  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0531797  normal  0.27422 
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  53.96 
 
 
222 aa  132  3e-30  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_014210  Ndas_3074  Holliday junction resolvase YqgF  50.62 
 
 
161 aa  131  5e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.459764 
 
 
-
 
NC_013441  Gbro_2321  Holliday junction resolvase YqgF  56.16 
 
 
143 aa  131  5e-30  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2379  Holliday junction resolvase-like protein  53.55 
 
 
171 aa  131  6e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  52.32 
 
 
169 aa  130  1.0000000000000001e-29  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  52.32 
 
 
169 aa  130  1.0000000000000001e-29  Mycobacterium sp. KMS  Bacteria  normal  normal  0.345644 
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  53.25 
 
 
175 aa  130  1.0000000000000001e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  52.32 
 
 
169 aa  129  2.0000000000000002e-29  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0472019 
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  48.7 
 
 
175 aa  129  3e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.454353 
 
 
-
 
NC_014165  Tbis_2046  Holliday junction resolvase YqgF  52.94 
 
 
163 aa  124  5e-28  Thermobispora bispora DSM 43833  Bacteria  normal  0.0425259  normal 
 
 
-
 
NC_009953  Sare_1820  Holliday junction resolvase YqgF  47.97 
 
 
153 aa  122  3e-27  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0000610168 
 
 
-
 
NC_009380  Strop_1829  Holliday junction resolvase YqgF  47.68 
 
 
153 aa  121  6e-27  Salinispora tropica CNB-440  Bacteria  normal  0.0551936  normal 
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  49.31 
 
 
202 aa  121  6e-27  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal 
 
 
-
 
NC_008541  Arth_2277  Holliday junction resolvase YqgF  45.91 
 
 
199 aa  119  1.9999999999999998e-26  Arthrobacter sp. FB24  Bacteria  normal  0.117352  n/a   
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  47.17 
 
 
161 aa  117  9e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_013169  Ksed_12520  conserved hypothetical protein TIGR00250  50.68 
 
 
161 aa  115  3.9999999999999997e-25  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.101388  normal  0.418633 
 
 
-
 
NC_009565  TBFG_12575  Holliday junction resolvase-like protein  51.32 
 
 
170 aa  115  5e-25  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00396279  normal  0.126571 
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  46.72 
 
 
141 aa  112  3e-24  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal 
 
 
-
 
NC_011886  Achl_2014  Holliday junction resolvase YqgF  43.58 
 
 
207 aa  111  5e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000330035 
 
 
-
 
NC_013235  Namu_3296  Holliday junction resolvase YqgF  48.3 
 
 
169 aa  105  3e-22  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000134676  normal  0.0641237 
 
 
-
 
NC_013510  Tcur_2136  Holliday junction resolvase YqgF  49.35 
 
 
152 aa  104  9e-22  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000271405  n/a   
 
 
-
 
NC_013093  Amir_5264  Holliday junction resolvase YqgF  46.54 
 
 
170 aa  102  4e-21  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2069  Holliday junction resolvase-like protein  49.69 
 
 
159 aa  101  6e-21  Thermobifida fusca YX  Bacteria  normal  0.0705886  n/a   
 
 
-
 
NC_013159  Svir_15280  conserved hypothetical protein TIGR00250  46.76 
 
 
154 aa  99.4  2e-20  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0307172  normal  0.652486 
 
 
-
 
NC_009664  Krad_3031  Holliday junction resolvase YqgF  52.11 
 
 
188 aa  97.8  8e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  37.93 
 
 
139 aa  96.3  2e-19  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0212683 
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  37.93 
 
 
139 aa  96.3  2e-19  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  40 
 
 
151 aa  95.5  4e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0615  putative endonuclease for recombination  37.75 
 
 
152 aa  90.1  1e-17  Bifidobacterium longum DJO10A  Bacteria  normal  0.105236  n/a   
 
 
-
 
NC_012803  Mlut_12710  putative Holliday junction resolvase  50 
 
 
189 aa  90.5  1e-17  Micrococcus luteus NCTC 2665  Bacteria  normal  0.84059  n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  40.29 
 
 
151 aa  89.7  2e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  36.88 
 
 
150 aa  89.4  3e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  39.31 
 
 
158 aa  88.6  4e-17  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  36.11 
 
 
149 aa  88.6  4e-17  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_013721  HMPREF0424_0376  RNAse YqgF  37.25 
 
 
152 aa  87.8  8e-17  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_011145  AnaeK_2633  Holliday junction resolvase-like protein  42.65 
 
 
137 aa  85.5  4e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.854397  n/a   
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  42.14 
 
 
137 aa  85.1  5e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.52249 
 
 
-
 
NC_011891  A2cp1_2727  Holliday junction resolvase-like protein  42.65 
 
 
137 aa  85.1  6e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0088  Holliday junction resolvase YqgF  39.86 
 
 
149 aa  84.7  7e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007493  RSP_2684  Holliday junction resolvase-like protein  43.45 
 
 
160 aa  83.2  0.000000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.173322  n/a   
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  39.29 
 
 
146 aa  82.8  0.000000000000002  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3023  Holliday junction resolvase-like protein  39.29 
 
 
160 aa  82.8  0.000000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.438725  normal  0.394583 
 
 
-
 
NC_007964  Nham_2279  Holliday junction resolvase-like protein  42.14 
 
 
168 aa  82.8  0.000000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  0.273152  n/a   
 
 
-
 
NC_009049  Rsph17029_1342  Holliday junction resolvase-like protein  43.45 
 
 
160 aa  83.2  0.000000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00888056  normal  0.184568 
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  35.97 
 
 
137 aa  82.8  0.000000000000003  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  34.48 
 
 
149 aa  82  0.000000000000004  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  41.91 
 
 
137 aa  81.6  0.000000000000005  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  42.07 
 
 
160 aa  81.6  0.000000000000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  43.17 
 
 
142 aa  81.6  0.000000000000006  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal 
 
 
-
 
NC_011004  Rpal_3523  Holliday junction resolvase-like protein  40.4 
 
 
160 aa  81.3  0.000000000000007  Rhodopseudomonas palustris TIE-1  Bacteria  hitchhiker  0.00889049  n/a   
 
 
-
 
NC_009952  Dshi_1064  Holliday junction resolvase-like protein  41.38 
 
 
163 aa  81.3  0.000000000000008  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.282287  normal 
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  39.19 
 
 
157 aa  81.3  0.000000000000008  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2429  Holliday junction resolvase-like protein  40.71 
 
 
160 aa  80.5  0.00000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0446184 
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  35.51 
 
 
141 aa  80.1  0.00000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_013440  Hoch_5401  Holliday junction resolvase YqgF  45 
 
 
139 aa  79.3  0.00000000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.616966  normal  0.68966 
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  38.93 
 
 
158 aa  80.1  0.00000000000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal 
 
 
-
 
NC_007406  Nwi_2004  Holliday junction resolvase-like protein  39.29 
 
 
163 aa  78.2  0.00000000000006  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.166059  normal  0.662003 
 
 
-
 
NC_009485  BBta_4721  Holliday junction resolvase-like protein  40 
 
 
161 aa  78.2  0.00000000000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  38.97 
 
 
153 aa  78.2  0.00000000000006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_011883  Ddes_0031  Holliday junction resolvase YqgF  42.11 
 
 
140 aa  77.8  0.00000000000008  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  34.29 
 
 
139 aa  77.8  0.00000000000008  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  37.93 
 
 
146 aa  77.8  0.00000000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  39.71 
 
 
140 aa  77  0.0000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_009720  Xaut_3922  Holliday junction resolvase YqgF  39.29 
 
 
176 aa  77.4  0.0000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  37.59 
 
 
138 aa  74.7  0.0000000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  37.06 
 
 
144 aa  75.1  0.0000000000006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_013515  Smon_0417  Holliday junction resolvase YqgF  35.21 
 
 
142 aa  74.3  0.0000000000008  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  32.85 
 
 
137 aa  74.7  0.0000000000008  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  36.5 
 
 
143 aa  74.7  0.0000000000008  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0475  Holliday junction resolvase YqgF  37.76 
 
 
170 aa  74.3  0.0000000000009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.437798  normal  0.0955854 
 
 
-
 
NC_007925  RPC_2255  Holliday junction resolvase-like protein  37.14 
 
 
163 aa  73.9  0.000000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.86844  normal  0.55099 
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  37.01 
 
 
163 aa  73.6  0.000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1708  Holliday junction resolvase YqgF  35.92 
 
 
151 aa  73.9  0.000000000001  Maricaulis maris MCS10  Bacteria  normal  normal  0.180151 
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  36.88 
 
 
143 aa  73.9  0.000000000001  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4344  Holliday junction resolvase YqgF  37.5 
 
 
168 aa  73.6  0.000000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.892789  normal  0.367855 
 
 
-
 
NC_013739  Cwoe_3035  Holliday junction resolvase YqgF  40.44 
 
 
133 aa  72  0.000000000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.0101605  normal  0.0662243 
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  36.23 
 
 
137 aa  72  0.000000000004  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_013203  Apar_0458  Holliday junction resolvase YqgF  35.21 
 
 
140 aa  72.4  0.000000000004  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  35.25 
 
 
158 aa  72  0.000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_5430  Holliday junction resolvase YqgF  37.06 
 
 
142 aa  71.2  0.000000000007  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  33.09 
 
 
138 aa  71.2  0.000000000008  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_002950  PG2202  Holliday junction resolvase-like protein  32.88 
 
 
138 aa  70.9  0.00000000001  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  35.51 
 
 
137 aa  70.5  0.00000000001  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  34.1 
 
 
182 aa  70.9  0.00000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  32.35 
 
 
139 aa  70.5  0.00000000001  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  36.3 
 
 
142 aa  70.5  0.00000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  35.51 
 
 
137 aa  70.1  0.00000000002  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  35.51 
 
 
137 aa  70.1  0.00000000002  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  35.51 
 
 
137 aa  70.1  0.00000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
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