Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_17700 |
Symbol | |
ID | 8633406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1975739 |
End bp | 1976242 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | conserved hypothetical protein TIGR00250 |
Protein accession | YP_003314531 |
Protein GI | 269795076 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00726332 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.269027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGACG ACCAGGCGCT CGAGCGCGGC GCACGCCTGT GCGTCGACGT CGGCAGCGTG CGCGTCGGGG TCGCGGTGAG CGACCCCGAC GGGCTCATCG CCACCCCGGT CGAGACGCTC CCGCGTGACG TGGTCACCGC GGCCAAGAAC CCGGCCGCGG TGCCGACGGA CCTGGCGGCT CTCGCGGAGC AGGTGGTCGA GCGCGGTGTG AAGGTTGTGT ACGTCGGGCT CCCTCGGCAC CTTTCGGGCG CCGAGGGCAC CGCGTCGGCG TCGGCACGTG CGTACGCTGT CCAGGTCGCC CGTCTGGTCG CGCCGGTCCC GGTGCGTCTG GTCGACGAGC GGATGAGCAC CGTCACGGCG CACCAGGCGC TGCACGCCTC CGGCCGGGCG GGGCGCAAGC ACCGCGCGGT GGTCGACCAG GTCGCCGCCG TCGTGATCCT GCAGTCGGCG CTCGACTTCG AGCGTGGCTC GGGCCGACGG CCCGGCGAGG TCGTCGAGGC GTAG
|
Protein sequence | MSDDQALERG ARLCVDVGSV RVGVAVSDPD GLIATPVETL PRDVVTAAKN PAAVPTDLAA LAEQVVERGV KVVYVGLPRH LSGAEGTASA SARAYAVQVA RLVAPVPVRL VDERMSTVTA HQALHASGRA GRKHRAVVDQ VAAVVILQSA LDFERGSGRR PGEVVEA
|
| |