Gene Ksed_12520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_12520 
Symbol 
ID8372760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp1289492 
End bp1289977 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content74% 
IMG OID644991529 
Productconserved hypothetical protein TIGR00250 
Protein accessionYP_003149049 
Protein GI256825089 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.101388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.418633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCTGGG CCGTGGACGT GGGCCTGGCC CGCGTCGGGG TGGCCAGCGG CGACCCCGAC 
GGTGTCCTGG CGACCCCGGT GGAGACCGTC GCGGTGGCCC CGGGTCTTAC CGCCCTCGAC
CGGGTGGTCC AGCTCGTCCG CCAGGAGGAG CGCTCCACGG GCGTCGTGGT GGGCCTGCCC
CGCCACCTCG ACGGGCACGA AAGCACCTCG GCCGTCGAGG CGCGCCGCTG GGCCACGGCT
CTGGCGTCCC GGCTGGGCCC CACGGTCCGG GTCTGGCTGG TCGACGAGCG CCTGAGCACC
GTGGCCGCCT CGCGCGGCAT GCGGGAGGCT GGTGTTCGTG CGAAAGAGCA GCGCACCCGC
ATCGACCAGG CCGCCGCGGT CGAGATCCTG CAGATGTCCC TCGATGCATG GCGTCGGGGC
TCTAGAATCG GCGAGCTGGT CCCCGGTCGC AAGCCGCGCA GTCGAGCGGC CGGCAGGACT
CCGTGA
 
Protein sequence
MVWAVDVGLA RVGVASGDPD GVLATPVETV AVAPGLTALD RVVQLVRQEE RSTGVVVGLP 
RHLDGHESTS AVEARRWATA LASRLGPTVR VWLVDERLST VAASRGMREA GVRAKEQRTR
IDQAAAVEIL QMSLDAWRRG SRIGELVPGR KPRSRAAGRT P