Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_12520 |
Symbol | |
ID | 8372760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | + |
Start bp | 1289492 |
End bp | 1289977 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644991529 |
Product | conserved hypothetical protein TIGR00250 |
Protein accession | YP_003149049 |
Protein GI | 256825089 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.101388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.418633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCTGGG CCGTGGACGT GGGCCTGGCC CGCGTCGGGG TGGCCAGCGG CGACCCCGAC GGTGTCCTGG CGACCCCGGT GGAGACCGTC GCGGTGGCCC CGGGTCTTAC CGCCCTCGAC CGGGTGGTCC AGCTCGTCCG CCAGGAGGAG CGCTCCACGG GCGTCGTGGT GGGCCTGCCC CGCCACCTCG ACGGGCACGA AAGCACCTCG GCCGTCGAGG CGCGCCGCTG GGCCACGGCT CTGGCGTCCC GGCTGGGCCC CACGGTCCGG GTCTGGCTGG TCGACGAGCG CCTGAGCACC GTGGCCGCCT CGCGCGGCAT GCGGGAGGCT GGTGTTCGTG CGAAAGAGCA GCGCACCCGC ATCGACCAGG CCGCCGCGGT CGAGATCCTG CAGATGTCCC TCGATGCATG GCGTCGGGGC TCTAGAATCG GCGAGCTGGT CCCCGGTCGC AAGCCGCGCA GTCGAGCGGC CGGCAGGACT CCGTGA
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Protein sequence | MVWAVDVGLA RVGVASGDPD GVLATPVETV AVAPGLTALD RVVQLVRQEE RSTGVVVGLP RHLDGHESTS AVEARRWATA LASRLGPTVR VWLVDERLST VAASRGMREA GVRAKEQRTR IDQAAAVEIL QMSLDAWRRG SRIGELVPGR KPRSRAAGRT P
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