More than 300 homologs were found in PanDaTox collection
for query gene Phep_0074 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_0074  Holliday junction resolvase YqgF  100 
 
 
138 aa  284  2e-76  Pedobacter heparinus DSM 2366  Bacteria  normal  0.974882  normal 
 
 
-
 
NC_013037  Dfer_4051  Holliday junction resolvase YqgF  58.39 
 
 
137 aa  167  3e-41  Dyadobacter fermentans DSM 18053  Bacteria  normal  hitchhiker  0.00000789262 
 
 
-
 
NC_008255  CHU_0692  Holliday junction resolvase-like protein  57.66 
 
 
152 aa  167  4e-41  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.458381 
 
 
-
 
NC_013730  Slin_5430  Holliday junction resolvase YqgF  52.17 
 
 
142 aa  154  5.0000000000000005e-37  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_2528  Holliday junction resolvase-like protein  52.17 
 
 
138 aa  151  2e-36  Flavobacterium johnsoniae UW101  Bacteria  normal  0.551236  n/a   
 
 
-
 
NC_013132  Cpin_1903  Holliday junction resolvase YqgF  54.07 
 
 
136 aa  151  2.9999999999999998e-36  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_1395  Holliday junction resolvase YqgF  54.96 
 
 
143 aa  147  7e-35  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_06155  Holliday junction resolvase-like protein  52.63 
 
 
135 aa  141  3e-33  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG2202  Holliday junction resolvase-like protein  45.93 
 
 
138 aa  132  9.999999999999999e-31  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_010830  Aasi_1327  Holliday junction resolvase-like protein  45.26 
 
 
141 aa  128  3e-29  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.513618 
 
 
-
 
NC_008639  Cpha266_2570  Holliday junction resolvase YqgF  39.26 
 
 
142 aa  107  7.000000000000001e-23  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00347975  n/a   
 
 
-
 
NC_010831  Cphamn1_2429  Holliday junction resolvase YqgF  39.1 
 
 
144 aa  104  4e-22  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0873  Holliday junction resolvase YqgF  36.3 
 
 
145 aa  99.4  2e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_2047  Holliday junction resolvase YqgF  34.81 
 
 
141 aa  98.6  2e-20  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_2162  Holliday junction resolvase YqgF  35.34 
 
 
142 aa  93.2  1e-18  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.337322  normal 
 
 
-
 
NC_007514  Cag_0014  Holliday junction resolvase YqgF  34.81 
 
 
140 aa  92  2e-18  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.639301  n/a   
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  38.69 
 
 
153 aa  91.7  3e-18  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  40.15 
 
 
137 aa  92  3e-18  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  40.15 
 
 
137 aa  92  3e-18  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_2406  Holliday junction resolvase YqgF  33.33 
 
 
142 aa  91.3  4e-18  Chlorobium limicola DSM 245  Bacteria  normal  0.406379  n/a   
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  36.62 
 
 
141 aa  86.7  1e-16  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  37.68 
 
 
146 aa  85.5  2e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  34.03 
 
 
143 aa  85.9  2e-16  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  33.09 
 
 
140 aa  85.1  3e-16  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  32.85 
 
 
141 aa  84.3  5e-16  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.140554 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  34.51 
 
 
141 aa  83.2  0.000000000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  35.77 
 
 
145 aa  82  0.000000000000002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  35.29 
 
 
137 aa  81.6  0.000000000000003  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  34.03 
 
 
147 aa  81.3  0.000000000000004  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  32.14 
 
 
139 aa  79.7  0.00000000000001  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  34.53 
 
 
141 aa  79.3  0.00000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  32.14 
 
 
140 aa  78.6  0.00000000000003  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  34.31 
 
 
142 aa  77.8  0.00000000000004  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  31.88 
 
 
139 aa  77.8  0.00000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000233904 
 
 
-
 
NC_013515  Smon_0417  Holliday junction resolvase YqgF  34.56 
 
 
142 aa  77  0.00000000000007  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  34.75 
 
 
150 aa  77.4  0.00000000000007  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  30.83 
 
 
141 aa  77.4  0.00000000000007  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal 
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  37.41 
 
 
141 aa  77  0.00000000000007  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  38.13 
 
 
151 aa  77  0.00000000000008  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010508  Bcenmc03_0836  Holliday junction resolvase-like protein  35.51 
 
 
149 aa  76.6  0.0000000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.311364  hitchhiker  0.00221177 
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  34.27 
 
 
146 aa  76.3  0.0000000000001  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_007510  Bcep18194_A3963  Holliday junction resolvase-like protein  36.3 
 
 
149 aa  76.3  0.0000000000001  Burkholderia sp. 383  Bacteria  normal  normal  0.539384 
 
 
-
 
NC_011060  Ppha_2805  Holliday junction resolvase YqgF  30.6 
 
 
145 aa  76.3  0.0000000000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0383  Holliday junction resolvase-like protein  35.51 
 
 
149 aa  76.6  0.0000000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0865  Holliday junction resolvase-like protein  35.51 
 
 
149 aa  76.6  0.0000000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  35.71 
 
 
142 aa  75.9  0.0000000000002  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  33.1 
 
 
150 aa  75.5  0.0000000000002  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  33.33 
 
 
160 aa  75.9  0.0000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal 
 
 
-
 
NC_013889  TK90_2407  Holliday junction resolvase YqgF  33.33 
 
 
130 aa  75.1  0.0000000000003  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.664688  normal  0.90932 
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  28.87 
 
 
142 aa  75.1  0.0000000000003  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0738  Holliday junction resolvase-like protein  36.76 
 
 
149 aa  74.7  0.0000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.89107  n/a   
 
 
-
 
NC_010551  BamMC406_0755  Holliday junction resolvase-like protein  36.76 
 
 
149 aa  74.7  0.0000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.302865  normal  0.26532 
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  37.31 
 
 
158 aa  75.1  0.0000000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  24.26 
 
 
222 aa  74.7  0.0000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_010084  Bmul_2523  Holliday junction resolvase-like protein  34.78 
 
 
149 aa  74.7  0.0000000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.159244 
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  34.59 
 
 
158 aa  73.9  0.0000000000007  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  28.57 
 
 
157 aa  73.9  0.0000000000007  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0244  Holliday junction resolvase-like protein  34.93 
 
 
138 aa  73.6  0.0000000000009  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.535412  n/a   
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  27.94 
 
 
163 aa  73.6  0.0000000000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_013525  Tter_0088  Holliday junction resolvase YqgF  34.75 
 
 
149 aa  73.2  0.000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  33.33 
 
 
146 aa  72.8  0.000000000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2684  Holliday junction resolvase-like protein  31.21 
 
 
160 aa  72  0.000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.173322  n/a   
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  29.85 
 
 
142 aa  72  0.000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1342  Holliday junction resolvase-like protein  31.21 
 
 
160 aa  72  0.000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00888056  normal  0.184568 
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  33.57 
 
 
175 aa  72.4  0.000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  31.43 
 
 
138 aa  72  0.000000000003  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  30.28 
 
 
137 aa  71.6  0.000000000003  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  30.5 
 
 
137 aa  70.9  0.000000000005  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  30.5 
 
 
137 aa  70.9  0.000000000005  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  30.5 
 
 
137 aa  70.9  0.000000000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  30.5 
 
 
137 aa  70.9  0.000000000005  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  30.5 
 
 
137 aa  70.9  0.000000000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  33.82 
 
 
149 aa  71.2  0.000000000005  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  30.5 
 
 
137 aa  70.9  0.000000000005  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  30.28 
 
 
137 aa  71.2  0.000000000005  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  30.5 
 
 
137 aa  70.9  0.000000000005  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  32.12 
 
 
149 aa  70.9  0.000000000006  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_010622  Bphy_2326  Holliday junction resolvase-like protein  35.82 
 
 
151 aa  70.9  0.000000000006  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0635951 
 
 
-
 
NC_014210  Ndas_3074  Holliday junction resolvase YqgF  28.78 
 
 
161 aa  70.5  0.000000000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.459764 
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  31.62 
 
 
137 aa  70.5  0.000000000007  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  30.5 
 
 
137 aa  70.5  0.000000000007  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_009439  Pmen_0399  Holliday junction resolvase-like protein  36.5 
 
 
144 aa  70.5  0.000000000007  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3638  Holliday junction resolvase-like protein  33.09 
 
 
142 aa  70.5  0.000000000008  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3664  Holliday junction resolvase-like protein  31.21 
 
 
165 aa  70.5  0.000000000008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0540  Holliday junction resolvase YqgF  31.39 
 
 
156 aa  70.1  0.000000000009  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  32.14 
 
 
138 aa  69.7  0.00000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  35.17 
 
 
139 aa  70.1  0.00000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  31.62 
 
 
151 aa  70.1  0.00000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_007492  Pfl01_5312  Holliday junction resolvase-like protein  34.31 
 
 
145 aa  70.1  0.00000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0190801  normal  0.217295 
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  29.17 
 
 
151 aa  69.7  0.00000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal 
 
 
-
 
NC_007651  BTH_I1463  Holliday junction resolvase-like protein  37.78 
 
 
146 aa  69.7  0.00000000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4721  Holliday junction resolvase-like protein  31.85 
 
 
161 aa  69.7  0.00000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3810  Holliday junction resolvase-like protein  35.82 
 
 
146 aa  70.1  0.00000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  35.17 
 
 
139 aa  70.1  0.00000000001  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0212683 
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  28.17 
 
 
139 aa  69.7  0.00000000001  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
NC_008578  Acel_1329  Holliday junction resolvase YqgF  31.88 
 
 
173 aa  70.1  0.00000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0531797  normal  0.27422 
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  30.07 
 
 
158 aa  69.7  0.00000000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal 
 
 
-
 
NC_009952  Dshi_1064  Holliday junction resolvase-like protein  29.63 
 
 
163 aa  69.7  0.00000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.282287  normal 
 
 
-
 
NC_009080  BMA10247_1858  Holliday junction resolvase-like protein  34.33 
 
 
146 aa  68.9  0.00000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5046  Holliday junction resolvase-like protein  33.09 
 
 
141 aa  68.9  0.00000000002  Pseudomonas putida GB-1  Bacteria  normal  0.433304  normal 
 
 
-
 
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