| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0692 |
|---|
| Symbol | |
|---|
| ID | 4186467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 791496 |
|---|
| End bp | 791954 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638070698 |
|---|
| Product | Holliday junction resolvase-like protein |
|---|
| Protein accession | YP_677319 |
|---|
| Protein GI | 110637112 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
|---|
| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.458381 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTA TCCTGGCATT CGATTTTGGT ACTAAACGTA TTGGTATAGC AAGTACCGAC
CCGATGCAAA TCATTGCTAA TGCCCTGGAT ACAGTACATC CCAAAGATGT GGTTGTGTAT
CTTAAAAAAT ATCTGAATAC AGAACCCGTT GAAGCATTTG TGGTGGGCCT TCCACGTACA
CTGCAAAACG AAGAATCTTC CAACGCTGCC AATGTAAAAG CGTTCATTAA TCTTATTAAA
AAAAACTTTC CGCAAACTCC TATTTACGGC GTTGACGAAC GCTTTACATC CTCTATGGCT
TTTGATACCA TGCTGGCTGG GGGCGTGAGT AAAAAAGGCA GAAGAGACAA AGCAACTATT
GACAAGATCA GCGCAACCAT TATTCTGCAG TCTTTCATGG AACAGAAGCA GAATGGAACG
GCGACGATGA TTTTTAAACC GGATGACGCT AATAGCTGA
|
|---|
| Protein sequence | MARILAFDFG TKRIGIASTD PMQIIANALD TVHPKDVVVY LKKYLNTEPV EAFVVGLPRT
LQNEESSNAA NVKAFINLIK KNFPQTPIYG VDERFTSSMA FDTMLAGGVS KKGRRDKATI
DKISATIILQ SFMEQKQNGT ATMIFKPDDA NS
|
|---|
| |