| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0074 |
|---|
| Symbol | |
|---|
| ID | 8251158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 78081 |
|---|
| End bp | 78497 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644933723 |
|---|
| Product | Holliday junction resolvase YqgF |
|---|
| Protein accession | YP_003090362 |
|---|
| Protein GI | 255529990 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
|---|
| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.974882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGAA TCCTAGCTTT TGATTATGGT ACCAAACGTA TCGGGATAGC CGTTACAGAC
CCCCTGCAGA TTATTGCAAC AGGCCTGGAC ACCATACACC CTAAGGACAT TGTGGAGTAC
CTGAAAAAAT ACCTGTTGGC AGAACAGGTA GAAGCCTTTG TTTTTGGCGA CCCCAAACAA
ATGGACGGCA CACCCTCCGA ATCTGCCCAG CATGTAAAAG GCTTTGCCAA AACTTTGAAA
AAAACTTTTC CGGATATTCC GCAATACTGG ATAGATGAGC GTTTTACTTC AAAACTTGCC
CATCAGGCCA TTATGCAAAG CGGCCTGAAA AAACAGGACA GAAAAAATAA AGAACGTGTA
GACACCATAT CGGCAACTAT AATTCTGCAA TATTTTATGG AACAGCACCG TTTATAA
|
|---|
| Protein sequence | MPRILAFDYG TKRIGIAVTD PLQIIATGLD TIHPKDIVEY LKKYLLAEQV EAFVFGDPKQ
MDGTPSESAQ HVKGFAKTLK KTFPDIPQYW IDERFTSKLA HQAIMQSGLK KQDRKNKERV
DTISATIILQ YFMEQHRL
|
|---|
| |