294 homologs were found in PanDaTox collection
for query gene CA2559_06155 on replicon NC_014230
Organism: Croceibacter atlanticus HTCC2559



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014230  CA2559_06155  Holliday junction resolvase-like protein  100 
 
 
135 aa  275  1e-73  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_2528  Holliday junction resolvase-like protein  70.68 
 
 
138 aa  194  3e-49  Flavobacterium johnsoniae UW101  Bacteria  normal  0.551236  n/a   
 
 
-
 
NC_013132  Cpin_1903  Holliday junction resolvase YqgF  68.42 
 
 
136 aa  182  1.0000000000000001e-45  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_1395  Holliday junction resolvase YqgF  63.36 
 
 
143 aa  166  7e-41  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4051  Holliday junction resolvase YqgF  54.14 
 
 
137 aa  150  5.9999999999999996e-36  Dyadobacter fermentans DSM 18053  Bacteria  normal  hitchhiker  0.00000789262 
 
 
-
 
NC_002950  PG2202  Holliday junction resolvase-like protein  52.63 
 
 
138 aa  144  5e-34  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_013061  Phep_0074  Holliday junction resolvase YqgF  52.63 
 
 
138 aa  141  3e-33  Pedobacter heparinus DSM 2366  Bacteria  normal  0.974882  normal 
 
 
-
 
NC_013730  Slin_5430  Holliday junction resolvase YqgF  51.11 
 
 
142 aa  140  6e-33  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_0692  Holliday junction resolvase-like protein  48.87 
 
 
152 aa  132  1.9999999999999998e-30  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.458381 
 
 
-
 
NC_010830  Aasi_1327  Holliday junction resolvase-like protein  45.86 
 
 
141 aa  122  2e-27  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.513618 
 
 
-
 
NC_010831  Cphamn1_2429  Holliday junction resolvase YqgF  38.17 
 
 
144 aa  98.2  4e-20  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_2570  Holliday junction resolvase YqgF  37.4 
 
 
142 aa  92.4  2e-18  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00347975  n/a   
 
 
-
 
NC_011059  Paes_2162  Holliday junction resolvase YqgF  36.64 
 
 
142 aa  92  2e-18  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.337322  normal 
 
 
-
 
NC_013501  Rmar_0873  Holliday junction resolvase YqgF  35.61 
 
 
145 aa  91.7  3e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0014  Holliday junction resolvase YqgF  35.88 
 
 
140 aa  91.7  3e-18  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.639301  n/a   
 
 
-
 
NC_010803  Clim_2406  Holliday junction resolvase YqgF  37.4 
 
 
142 aa  88.6  2e-17  Chlorobium limicola DSM 245  Bacteria  normal  0.406379  n/a   
 
 
-
 
NC_007512  Plut_2047  Holliday junction resolvase YqgF  33.33 
 
 
141 aa  88.6  3e-17  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  38.52 
 
 
141 aa  85.9  2e-16  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  34.56 
 
 
141 aa  82.4  0.000000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.140554 
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  36.5 
 
 
137 aa  82  0.000000000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  36.5 
 
 
137 aa  82  0.000000000000002  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_2805  Holliday junction resolvase YqgF  34.35 
 
 
145 aa  80.5  0.000000000000007  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  29.1 
 
 
142 aa  79.7  0.00000000000001  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  38.24 
 
 
151 aa  77.8  0.00000000000005  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  33.33 
 
 
140 aa  77.4  0.00000000000007  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  35.66 
 
 
142 aa  76.3  0.0000000000001  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  33.57 
 
 
139 aa  74.7  0.0000000000004  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  35.07 
 
 
141 aa  74.3  0.0000000000005  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  31.16 
 
 
140 aa  73.9  0.0000000000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  32.09 
 
 
146 aa  73.6  0.0000000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  34.06 
 
 
153 aa  73.6  0.0000000000009  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  33.09 
 
 
141 aa  73.2  0.000000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  30.6 
 
 
137 aa  71.6  0.000000000003  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  31.11 
 
 
137 aa  71.6  0.000000000003  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  33.83 
 
 
151 aa  70.1  0.000000000009  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  31.85 
 
 
149 aa  69.3  0.00000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  30.66 
 
 
139 aa  68.2  0.00000000004  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  31.58 
 
 
142 aa  67.8  0.00000000005  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal 
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  32.59 
 
 
158 aa  67.4  0.00000000006  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_009632  SaurJH1_1707  Holliday junction resolvase-like protein  27.21 
 
 
142 aa  67  0.00000000008  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.24342  n/a   
 
 
-
 
NC_009487  SaurJH9_1673  Holliday junction resolvase-like protein  27.21 
 
 
142 aa  67  0.00000000008  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.514842  n/a   
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  33.33 
 
 
139 aa  66.2  0.0000000001  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0212683 
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  34.78 
 
 
145 aa  66.6  0.0000000001  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  33.33 
 
 
139 aa  66.2  0.0000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  30.94 
 
 
138 aa  66.2  0.0000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  29.58 
 
 
137 aa  66.6  0.0000000001  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_014212  Mesil_0224  Holliday junction resolvase YqgF  28.68 
 
 
135 aa  65.5  0.0000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.776353  normal  0.0108713 
 
 
-
 
NC_008148  Rxyl_1360  Holliday junction resolvase YqgF  30.3 
 
 
139 aa  65.5  0.0000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0122615  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  27.86 
 
 
137 aa  65.5  0.0000000002  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  28.87 
 
 
137 aa  65.9  0.0000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  30.6 
 
 
141 aa  65.9  0.0000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  28.89 
 
 
139 aa  65.1  0.0000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000233904 
 
 
-
 
NC_006055  Mfl464  Holliday junction resolvase  32.86 
 
 
142 aa  65.1  0.0000000003  Mesoplasma florum L1  Bacteria  normal  0.564085  n/a   
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  28.47 
 
 
137 aa  65.5  0.0000000003  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  33.58 
 
 
150 aa  65.1  0.0000000003  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  28.26 
 
 
147 aa  65.1  0.0000000003  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  28.68 
 
 
142 aa  65.1  0.0000000003  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_013515  Smon_0417  Holliday junction resolvase YqgF  31.82 
 
 
142 aa  65.1  0.0000000003  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_1350  Holliday junction resolvase YqgF  26.71 
 
 
167 aa  64.7  0.0000000004  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2951  Holliday junction resolvase YqgF  30.88 
 
 
136 aa  65.1  0.0000000004  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  28.99 
 
 
138 aa  64.3  0.0000000005  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  29.79 
 
 
143 aa  64.3  0.0000000005  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  29.41 
 
 
143 aa  64.7  0.0000000005  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP1180  Holliday junction resolvase-like protein  27.01 
 
 
142 aa  63.9  0.0000000006  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03294  Holliday junction resolvase-like protein  31.06 
 
 
143 aa  63.9  0.0000000006  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.659098  n/a   
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  28.17 
 
 
137 aa  64.3  0.0000000006  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  28.17 
 
 
137 aa  64.3  0.0000000006  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  28.17 
 
 
137 aa  64.3  0.0000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  28.17 
 
 
137 aa  64.3  0.0000000006  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  28.17 
 
 
137 aa  64.3  0.0000000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  31.51 
 
 
150 aa  63.9  0.0000000006  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  28.17 
 
 
137 aa  64.3  0.0000000006  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  28.17 
 
 
137 aa  63.9  0.0000000007  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  31.21 
 
 
161 aa  63.5  0.0000000009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  29.41 
 
 
158 aa  62.4  0.000000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal 
 
 
-
 
NC_012034  Athe_1211  Holliday junction resolvase YqgF  31.62 
 
 
138 aa  61.6  0.000000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.271637  n/a   
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  27.48 
 
 
141 aa  62  0.000000003  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal 
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  32.06 
 
 
163 aa  61.2  0.000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal 
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  31.82 
 
 
149 aa  61.2  0.000000004  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_007799  ECH_0460  hypothetical protein  32.59 
 
 
156 aa  61.2  0.000000005  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  28.79 
 
 
146 aa  60.8  0.000000005  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0059  Holliday junction resolvase-like protein  29.41 
 
 
148 aa  60.8  0.000000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0031  Holliday junction resolvase YqgF  33.08 
 
 
140 aa  60.8  0.000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  28.57 
 
 
222 aa  60.8  0.000000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  30.15 
 
 
160 aa  60.5  0.000000008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal 
 
 
-
 
NC_013203  Apar_0458  Holliday junction resolvase YqgF  29.85 
 
 
140 aa  60.5  0.000000008  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_007633  MCAP_0215  holliday junction resolvase, putative  33.09 
 
 
143 aa  59.7  0.00000001  Mycoplasma capricolum subsp. capricolum ATCC 27343  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  27.61 
 
 
142 aa  59.7  0.00000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  28.79 
 
 
144 aa  59.7  0.00000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  27.61 
 
 
138 aa  59.3  0.00000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5312  Holliday junction resolvase-like protein  31.16 
 
 
145 aa  58.9  0.00000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0190801  normal  0.217295 
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  28.68 
 
 
163 aa  58.9  0.00000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2668  Holliday junction resolvase YqgF  32.33 
 
 
143 aa  58.9  0.00000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.933138  normal 
 
 
-
 
NC_011761  AFE_3061  hypothetical protein  32.33 
 
 
143 aa  58.9  0.00000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3340  Holliday junction resolvase-like protein  30.66 
 
 
140 aa  58.5  0.00000003  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  28.89 
 
 
146 aa  58.5  0.00000003  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1131  Holliday junction resolvase-like protein  30.66 
 
 
141 aa  58.5  0.00000003  Shewanella pealeana ATCC 700345  Bacteria  normal  0.111461  n/a   
 
 
-
 
NC_010465  YPK_0836  Holliday junction resolvase-like protein  30.66 
 
 
140 aa  58.5  0.00000003  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0695104  n/a   
 
 
-
 
NC_009708  YpsIP31758_0834  Holliday junction resolvase-like protein  30.66 
 
 
140 aa  58.5  0.00000003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1143  Holliday junction resolvase-like protein  27.34 
 
 
139 aa  58.5  0.00000003  Shewanella loihica PV-4  Bacteria  normal  0.997205  normal  0.0325702 
 
 
-
 
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