Gene Ppha_2805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2805 
Symbol 
ID6462441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp2893778 
End bp2894215 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content54% 
IMG OID642728956 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_002019571 
Protein GI194337777 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGA CTCCAAAAAA AAGGGTGGTC GCCATCGACT ACGGAACAAA GCGCATCGGA 
ATGGCCCAGA GCGATCCCCT CTGGCTTTTC GCGCAGCCGG TCGGAACCTT TGACCGCGCC 
GGACTCTCCA AAGCGCTCGG TACCATGATA CAGTCCGATG ATATTGCTCT CGTCATTGTC 
GGCTACCCGC TCAGCGAAAA TGGCGAAAAA AACGCCATGA CCGGTGTGAT TGACCGCTTT 
CTGGAGACAC TTCATGAGGA GTTCCCCCAA CTGAGGATTG AAACCCTTGA TGAGCACCAT 
TCATCGAAGG ATGCACGCAG TATCCTCGTC GCATCCGGAA AATCAAGAAA GGTGCGGCAA 
CAGAAGGGGC GGGTCGACAG CGCAGCAGCC TGTATCCTGC TCAGAGAATA CCTTGAAAAC 
CAGGAAAATG AGCGCTAA
 
Protein sequence
MRLTPKKRVV AIDYGTKRIG MAQSDPLWLF AQPVGTFDRA GLSKALGTMI QSDDIALVIV 
GYPLSENGEK NAMTGVIDRF LETLHEEFPQ LRIETLDEHH SSKDARSILV ASGKSRKVRQ 
QKGRVDSAAA CILLREYLEN QENER