Gene VIBHAR_03575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_03575 
Symbol 
ID5552887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp3624034 
End bp3624444 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content50% 
IMG OID640909055 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_001446737 
Protein GI156975830 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTCG ATTTCGGCAC CAAGAGCATT GGTAGTGCCA TCGGGCAAGA AGTCACAGGC 
ACAGCCTCAC CGCTAAAAGC ATTCAAAGCG AATGACGGCA TTCCAAACTG GGATGATATC 
GAAAAGCAAA TTAAAGAGTG GCAACCAGAC CTATTAGTGG TGGGTTTGCC GACAGACTTA 
CATGGTAAAG ACCTAGAGAC CATCACGCCG CGAGCGAAGA AGTTCGCCAA CCGTCTGCAT 
GGTCGTTACG GTTTACCTGT TGAATTGCAT GATGAACGCC TATCAACGGC AGAAGCACGT 
GCAGAACTGT TCAGTATCGG TGGCTACAAG GCGCTATCAA AAGGCAATAT CGACTGCCAA 
TCCGCGGTGG TGATTCTTGA GAGCTGGTTT GAAAACCTTT GGGGTGAGTA G
 
Protein sequence
MAFDFGTKSI GSAIGQEVTG TASPLKAFKA NDGIPNWDDI EKQIKEWQPD LLVVGLPTDL 
HGKDLETITP RAKKFANRLH GRYGLPVELH DERLSTAEAR AELFSIGGYK ALSKGNIDCQ 
SAVVILESWF ENLWGE