Gene VC0395_A0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0018 
Symbol 
ID5136062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp13923 
End bp14345 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content51% 
IMG OID640531478 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_001215992 
Protein GI147674125 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGTA CCGTTATGGC CTTTGATTAC GGCACCAAAA GCATTGGCAG TGCAATCGGT 
CAAGAGATCA CGGGCACGGC GTCTCCGCTG AAAGCGTTTA AAGCCAATGA TGGCATCCCC 
AATTGGGATG AAATTGAAAA ACAGATCAAA GAGTGGCAAC CCAATTTATT GATTGTTGGC 
CTGCCTACCG ATCTGCACGG CAAAGATCTG GACACCATCA CCCCACGCGC GAAGAAGTTC 
GCTCAGCGTT TGCATGGCCG TTTTGGTTTG CCCGTAGAAC TGCATGATGA GCGTCTTTCC 
ACCACCGAAG CGCGCGCAGA ACTGTTCGCC ATGGGCGGTT ACAAAGCACT GAGCAAAGGC 
AATGTGGACT GCCAATCGGC GGTGATTATT CTAGAGAGTT GGTTTGAAAG TCAGTGGGGC 
TAA
 
Protein sequence
MSRTVMAFDY GTKSIGSAIG QEITGTASPL KAFKANDGIP NWDEIEKQIK EWQPNLLIVG 
LPTDLHGKDL DTITPRAKKF AQRLHGRFGL PVELHDERLS TTEARAELFA MGGYKALSKG 
NVDCQSAVII LESWFESQWG