273 homologs were found in PanDaTox collection
for query gene Gdia_3370 on replicon NC_011365
Organism: Gluconacetobacter diazotrophicus PAl 5



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011365  Gdia_3370  Holliday junction resolvase YqgF  100 
 
 
154 aa  303  8.000000000000001e-82  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.13465 
 
 
-
 
NC_009484  Acry_0873  Holliday junction resolvase YqgF  62.67 
 
 
158 aa  179  1e-44  Acidiphilium cryptum JF-5  Bacteria  normal  0.205729  n/a   
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  53.1 
 
 
182 aa  145  2.0000000000000003e-34  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_010511  M446_4344  Holliday junction resolvase YqgF  55.47 
 
 
168 aa  135  2e-31  Methylobacterium sp. 4-46  Bacteria  normal  0.892789  normal  0.367855 
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  55.88 
 
 
163 aa  135  2e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3178  Holliday junction resolvase YqgF  48.34 
 
 
161 aa  134  3.0000000000000003e-31  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.825708  n/a   
 
 
-
 
NC_011666  Msil_0742  Holliday junction resolvase-like protein  48.65 
 
 
161 aa  132  1.9999999999999998e-30  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0120989 
 
 
-
 
NC_010505  Mrad2831_0475  Holliday junction resolvase YqgF  51.13 
 
 
170 aa  127  6e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.437798  normal  0.0955854 
 
 
-
 
NC_011757  Mchl_3643  Holliday junction resolvase YqgF  54.89 
 
 
165 aa  126  1.0000000000000001e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.724014 
 
 
-
 
NC_010172  Mext_3319  Holliday junction resolvase YqgF  54.89 
 
 
160 aa  126  1.0000000000000001e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.587532  normal  0.657687 
 
 
-
 
NC_009511  Swit_0601  Holliday junction resolvase YqgF  53.73 
 
 
151 aa  126  1.0000000000000001e-28  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.613999 
 
 
-
 
NC_010725  Mpop_3519  Holliday junction resolvase YqgF  54.14 
 
 
165 aa  125  2.0000000000000002e-28  Methylobacterium populi BJ001  Bacteria  normal  0.432695  normal 
 
 
-
 
NC_010338  Caul_1518  Holliday junction resolvase YqgF  42.38 
 
 
164 aa  124  3e-28  Caulobacter sp. K31  Bacteria  normal  normal  0.470214 
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  46.58 
 
 
160 aa  122  2e-27  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal 
 
 
-
 
NC_010581  Bind_1895  Holliday junction resolvase-like protein  47.33 
 
 
165 aa  122  2e-27  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.273411  normal 
 
 
-
 
NC_009636  Smed_0941  Holliday junction resolvase-like protein  41.33 
 
 
165 aa  120  9e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.22726 
 
 
-
 
NC_011369  Rleg2_1518  Holliday junction resolvase-like protein  42 
 
 
163 aa  120  9e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.793177 
 
 
-
 
NC_012850  Rleg_1714  Holliday junction resolvase-like protein  42 
 
 
164 aa  119  1.9999999999999998e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.396791 
 
 
-
 
NC_011989  Avi_1768  Holliday junction resolvase-like protein  42.67 
 
 
158 aa  119  1.9999999999999998e-26  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0967  Holliday junction resolvase-like protein  46.97 
 
 
157 aa  118  3.9999999999999996e-26  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008783  BARBAKC583_0838  hypothetical protein  38.67 
 
 
161 aa  116  9.999999999999999e-26  Bartonella bacilliformis KC583  Bacteria  normal  0.115372  n/a   
 
 
-
 
NC_009952  Dshi_1064  Holliday junction resolvase-like protein  46.97 
 
 
163 aa  115  1.9999999999999998e-25  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.282287  normal 
 
 
-
 
NC_008254  Meso_1361  Holliday junction resolvase YqgF  42 
 
 
160 aa  115  1.9999999999999998e-25  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2684  Holliday junction resolvase-like protein  47.1 
 
 
160 aa  114  3.9999999999999997e-25  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.173322  n/a   
 
 
-
 
NC_009049  Rsph17029_1342  Holliday junction resolvase-like protein  47.1 
 
 
160 aa  114  3.9999999999999997e-25  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00888056  normal  0.184568 
 
 
-
 
NC_007802  Jann_2181  Holliday junction resolvase YqgF  49.63 
 
 
145 aa  114  6e-25  Jannaschia sp. CCS1  Bacteria  normal  0.659798  normal 
 
 
-
 
NC_007794  Saro_0906  Holliday junction resolvase-like protein  45.21 
 
 
155 aa  113  1.0000000000000001e-24  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.167999  n/a   
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  44.52 
 
 
158 aa  112  2.0000000000000002e-24  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal 
 
 
-
 
NC_009668  Oant_3664  Holliday junction resolvase-like protein  42 
 
 
165 aa  110  6e-24  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  45.11 
 
 
140 aa  110  7.000000000000001e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_009504  BOV_A0563  Holliday junction resolvase-like protein  41.78 
 
 
162 aa  109  1.0000000000000001e-23  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3023  Holliday junction resolvase-like protein  46.21 
 
 
160 aa  108  3e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.438725  normal  0.394583 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  38.06 
 
 
139 aa  107  4.0000000000000004e-23  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_009485  BBta_4721  Holliday junction resolvase-like protein  46.97 
 
 
161 aa  107  4.0000000000000004e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0597  Holliday junction resolvase-like protein  41.1 
 
 
162 aa  107  5e-23  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0925  Holliday junction resolvase YqgF  46.27 
 
 
152 aa  107  6e-23  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.233016  normal 
 
 
-
 
NC_009720  Xaut_3922  Holliday junction resolvase YqgF  47.33 
 
 
176 aa  105  2e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_2279  Holliday junction resolvase-like protein  46.21 
 
 
168 aa  105  3e-22  Nitrobacter hamburgensis X14  Bacteria  normal  0.273152  n/a   
 
 
-
 
NC_007778  RPB_2429  Holliday junction resolvase-like protein  45.45 
 
 
160 aa  104  4e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0446184 
 
 
-
 
NC_007406  Nwi_2004  Holliday junction resolvase-like protein  45.45 
 
 
163 aa  104  5e-22  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.166059  normal  0.662003 
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  39.85 
 
 
142 aa  103  1e-21  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_011004  Rpal_3523  Holliday junction resolvase-like protein  47.73 
 
 
160 aa  102  3e-21  Rhodopseudomonas palustris TIE-1  Bacteria  hitchhiker  0.00889049  n/a   
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  39.85 
 
 
141 aa  99.8  1e-20  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_007925  RPC_2255  Holliday junction resolvase-like protein  43.94 
 
 
163 aa  97.8  5e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.86844  normal  0.55099 
 
 
-
 
NC_008528  OEOE_1165  RNase H-like ribonuclease  40.88 
 
 
144 aa  96.3  1e-19  Oenococcus oeni PSU-1  Bacteria  normal  0.345189  n/a   
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  38.89 
 
 
139 aa  94.7  3e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000233904 
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  35.34 
 
 
137 aa  94.7  4e-19  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  35.34 
 
 
137 aa  94.7  4e-19  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  37.23 
 
 
137 aa  93.2  1e-18  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  38.41 
 
 
137 aa  91.7  3e-18  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  39.86 
 
 
138 aa  91.7  3e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  37.59 
 
 
140 aa  91.7  3e-18  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_008531  LEUM_0558  Holliday junction resolvase-like protein  34.27 
 
 
143 aa  91.7  3e-18  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  38.41 
 
 
137 aa  91.3  4e-18  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  38.41 
 
 
137 aa  91.3  4e-18  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  38.41 
 
 
137 aa  91.3  4e-18  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  38.41 
 
 
137 aa  91.3  4e-18  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  38.41 
 
 
137 aa  91.3  4e-18  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  38.41 
 
 
137 aa  91.3  4e-18  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  38.41 
 
 
137 aa  90.9  5e-18  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  38.69 
 
 
137 aa  91.3  5e-18  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  38.69 
 
 
137 aa  90.9  6e-18  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  38.46 
 
 
137 aa  90.5  8e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  34.59 
 
 
139 aa  89.4  2e-17  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  36.96 
 
 
143 aa  89  2e-17  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  35.34 
 
 
141 aa  89  2e-17  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.140554 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  38.24 
 
 
142 aa  88.6  3e-17  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  38.41 
 
 
138 aa  88.6  3e-17  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_002976  SERP1180  Holliday junction resolvase-like protein  36.96 
 
 
142 aa  86.3  1e-16  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  38.81 
 
 
141 aa  86.7  1e-16  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_009487  SaurJH9_1673  Holliday junction resolvase-like protein  36.43 
 
 
142 aa  85.5  2e-16  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.514842  n/a   
 
 
-
 
NC_009632  SaurJH1_1707  Holliday junction resolvase-like protein  36.43 
 
 
142 aa  85.5  2e-16  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.24342  n/a   
 
 
-
 
NC_013525  Tter_0088  Holliday junction resolvase YqgF  38.97 
 
 
149 aa  85.5  3e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  34.56 
 
 
150 aa  84.7  4e-16  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  35.82 
 
 
146 aa  84.3  5e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  34.51 
 
 
139 aa  84  7e-16  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
NC_013440  Hoch_5401  Holliday junction resolvase YqgF  43.17 
 
 
139 aa  83.2  0.000000000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.616966  normal  0.68966 
 
 
-
 
NC_008347  Mmar10_1708  Holliday junction resolvase YqgF  35.33 
 
 
151 aa  81.6  0.000000000000003  Maricaulis maris MCS10  Bacteria  normal  normal  0.180151 
 
 
-
 
NC_004116  SAG2090  Holliday junction resolvase-like protein  32.62 
 
 
136 aa  79.7  0.00000000000001  Streptococcus agalactiae 2603V/R  Bacteria  hitchhiker  0.000724166  n/a   
 
 
-
 
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  32.87 
 
 
147 aa  79.3  0.00000000000002  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  36.92 
 
 
144 aa  79  0.00000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  35.07 
 
 
153 aa  79  0.00000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  36.55 
 
 
143 aa  77.8  0.00000000000005  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0915  Holliday junction resolvase YqgF  35.82 
 
 
141 aa  75.9  0.0000000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.242003  n/a   
 
 
-
 
NC_002620  TC0456  Holliday junction resolvase-like protein  31.47 
 
 
148 aa  74.3  0.0000000000005  Chlamydia muridarum Nigg  Bacteria  normal  0.0531997  n/a   
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  40.15 
 
 
137 aa  74.7  0.0000000000005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.52249 
 
 
-
 
NC_010816  BLD_0615  putative endonuclease for recombination  33.56 
 
 
152 aa  73.9  0.0000000000008  Bifidobacterium longum DJO10A  Bacteria  normal  0.105236  n/a   
 
 
-
 
NC_014210  Ndas_3074  Holliday junction resolvase YqgF  38.36 
 
 
161 aa  73.6  0.0000000000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.459764 
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  35.34 
 
 
146 aa  73.2  0.000000000001  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_008699  Noca_2408  Holliday junction resolvase-like protein  40.88 
 
 
156 aa  73.6  0.000000000001  Nocardioides sp. JS614  Bacteria  normal  0.332292  n/a   
 
 
-
 
NC_013721  HMPREF0424_0376  RNAse YqgF  34.01 
 
 
152 aa  72  0.000000000003  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  35.77 
 
 
142 aa  71.6  0.000000000003  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  39.1 
 
 
163 aa  71.2  0.000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal 
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  35.11 
 
 
151 aa  70.9  0.000000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  33.33 
 
 
149 aa  69.3  0.00000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  34.85 
 
 
158 aa  68.9  0.00000000003  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_013172  Bfae_16350  conserved hypothetical protein TIGR00250  37.23 
 
 
181 aa  68.6  0.00000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  40.3 
 
 
137 aa  68.9  0.00000000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  30.15 
 
 
141 aa  67.8  0.00000000005  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_011891  A2cp1_2727  Holliday junction resolvase-like protein  38.35 
 
 
137 aa  67.4  0.00000000006  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>