More than 300 homologs were found in PanDaTox collection
for query gene DehaBAV1_0048 on replicon NC_009455
Organism: Dehalococcoides sp. BAV1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009455  DehaBAV1_0048  Holliday junction resolvase YqgF  100 
 
 
133 aa  273  8e-73  Dehalococcoides sp. BAV1  Bacteria  normal  0.112526  n/a   
 
 
-
 
NC_002936  DET0051  hypothetical protein  90.23 
 
 
133 aa  235  1e-61  Dehalococcoides ethenogenes 195  Bacteria  normal  0.673741  n/a   
 
 
-
 
NC_013552  DhcVS_51  Holliday junction resolvase  87.97 
 
 
133 aa  232  1.0000000000000001e-60  Dehalococcoides sp. VS  Bacteria  normal  0.444327  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  41.27 
 
 
146 aa  100  8e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  42.06 
 
 
141 aa  100  9e-21  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  38.89 
 
 
139 aa  97.1  8e-20  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  36.57 
 
 
146 aa  93.6  9e-19  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  40.16 
 
 
139 aa  93.2  1e-18  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  39.06 
 
 
137 aa  87.8  5e-17  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  41.86 
 
 
139 aa  87.8  5e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000233904 
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  41.41 
 
 
137 aa  87.4  6e-17  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  37.4 
 
 
158 aa  85.5  2e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  40.48 
 
 
145 aa  85.5  2e-16  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  37.3 
 
 
140 aa  84.3  6e-16  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  37.5 
 
 
137 aa  83.6  7e-16  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  37.5 
 
 
137 aa  83.6  7e-16  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  36.84 
 
 
149 aa  82.8  0.000000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_004116  SAG2090  Holliday junction resolvase-like protein  33.59 
 
 
136 aa  80.5  0.000000000000007  Streptococcus agalactiae 2603V/R  Bacteria  hitchhiker  0.000724166  n/a   
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  35.94 
 
 
150 aa  80.1  0.000000000000009  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_011989  Avi_1768  Holliday junction resolvase-like protein  34.92 
 
 
158 aa  79.7  0.00000000000001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  34.4 
 
 
141 aa  79.3  0.00000000000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  34.81 
 
 
149 aa  79.7  0.00000000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_010159  YpAngola_A3340  Holliday junction resolvase-like protein  32.28 
 
 
140 aa  79  0.00000000000002  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  36.76 
 
 
161 aa  79  0.00000000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  31.75 
 
 
138 aa  79.3  0.00000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0834  Holliday junction resolvase-like protein  32.28 
 
 
140 aa  79  0.00000000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  35.71 
 
 
141 aa  79  0.00000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  34.38 
 
 
140 aa  79  0.00000000000002  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_010465  YPK_0836  Holliday junction resolvase-like protein  32.28 
 
 
140 aa  79  0.00000000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0695104  n/a   
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  40.16 
 
 
141 aa  78.2  0.00000000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  35.94 
 
 
137 aa  78.2  0.00000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  33.33 
 
 
139 aa  78.6  0.00000000000003  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  35.16 
 
 
137 aa  77.8  0.00000000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  31.39 
 
 
150 aa  78.2  0.00000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  36.22 
 
 
142 aa  78.2  0.00000000000004  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0873  Holliday junction resolvase YqgF  34.62 
 
 
158 aa  77.8  0.00000000000005  Acidiphilium cryptum JF-5  Bacteria  normal  0.205729  n/a   
 
 
-
 
NC_007954  Sden_2673  Holliday junction resolvase-like protein  30.4 
 
 
141 aa  77.8  0.00000000000005  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000201914  n/a   
 
 
-
 
NC_012880  Dd703_0543  Holliday junction resolvase-like protein  32.56 
 
 
139 aa  77.8  0.00000000000005  Dickeya dadantii Ech703  Bacteria  normal  0.0491649  n/a   
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  32.28 
 
 
151 aa  77  0.00000000000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013203  Apar_0458  Holliday junction resolvase YqgF  31.75 
 
 
140 aa  76.3  0.0000000000001  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  35.71 
 
 
158 aa  76.3  0.0000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal 
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  31.75 
 
 
142 aa  75.9  0.0000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_009832  Spro_4028  Holliday junction resolvase-like protein  34.13 
 
 
140 aa  75.9  0.0000000000002  Serratia proteamaculans 568  Bacteria  normal  0.290268  hitchhiker  0.00115108 
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  36.51 
 
 
182 aa  75.1  0.0000000000003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  34.38 
 
 
137 aa  75.1  0.0000000000003  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  34.38 
 
 
137 aa  75.1  0.0000000000003  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  32.03 
 
 
143 aa  75.1  0.0000000000003  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  34.38 
 
 
137 aa  74.7  0.0000000000004  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_011126  HY04AAS1_0205  Holliday junction resolvase YqgF  34.71 
 
 
123 aa  74.7  0.0000000000004  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  34.38 
 
 
137 aa  74.7  0.0000000000004  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  34.38 
 
 
137 aa  74.7  0.0000000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  34.38 
 
 
137 aa  74.7  0.0000000000004  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_010172  Mext_3319  Holliday junction resolvase YqgF  39.68 
 
 
160 aa  74.7  0.0000000000004  Methylobacterium extorquens PA1  Bacteria  normal  0.587532  normal  0.657687 
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  34.38 
 
 
137 aa  74.7  0.0000000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_011757  Mchl_3643  Holliday junction resolvase YqgF  39.68 
 
 
165 aa  74.7  0.0000000000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.724014 
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  34.38 
 
 
137 aa  74.7  0.0000000000004  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  34.38 
 
 
137 aa  74.7  0.0000000000004  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
CP001509  ECD_02779  Holliday junction resolvase-like protein  33.59 
 
 
138 aa  74.3  0.0000000000005  Escherichia coli BL21(DE3)  Bacteria  normal  0.358182  n/a   
 
 
-
 
CP001637  EcDH1_0746  Holliday junction resolvase YqgF  33.59 
 
 
138 aa  74.3  0.0000000000005  Escherichia coli DH1  Bacteria  normal  0.61838  n/a   
 
 
-
 
NC_009801  EcE24377A_3292  Holliday junction resolvase-like protein  33.59 
 
 
138 aa  74.3  0.0000000000005  Escherichia coli E24377A  Bacteria  normal  0.684819  n/a   
 
 
-
 
NC_012892  B21_02742  hypothetical protein  33.59 
 
 
138 aa  74.3  0.0000000000005  Escherichia coli BL21  Bacteria  normal  0.395069  n/a   
 
 
-
 
NC_009800  EcHS_A3107  Holliday junction resolvase-like protein  33.59 
 
 
138 aa  74.3  0.0000000000005  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3091  Holliday junction resolvase-like protein  33.59 
 
 
138 aa  74.3  0.0000000000005  Escherichia coli SMS-3-5  Bacteria  normal  0.372008  decreased coverage  0.00000514809 
 
 
-
 
NC_010468  EcolC_0765  Holliday junction resolvase-like protein  33.59 
 
 
138 aa  74.3  0.0000000000005  Escherichia coli ATCC 8739  Bacteria  normal  0.809741  hitchhiker  0.0000191582 
 
 
-
 
NC_010658  SbBS512_E3381  Holliday junction resolvase-like protein  33.59 
 
 
138 aa  74.3  0.0000000000005  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4252  Holliday junction resolvase-like protein  33.59 
 
 
138 aa  74.3  0.0000000000006  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.367892  normal  0.370097 
 
 
-
 
NC_009439  Pmen_0399  Holliday junction resolvase-like protein  32.03 
 
 
144 aa  73.9  0.0000000000006  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  30.16 
 
 
146 aa  73.9  0.0000000000007  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  33.33 
 
 
137 aa  73.9  0.0000000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.52249 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  32.81 
 
 
138 aa  73.6  0.0000000000008  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_007335  PMN2A_0199  Holliday junction resolvase YqgF  37.6 
 
 
144 aa  72.8  0.000000000001  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.102311  n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  32.28 
 
 
151 aa  73.2  0.000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  36.22 
 
 
222 aa  72.8  0.000000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_008321  Shewmr4_1198  Holliday junction resolvase-like protein  28.57 
 
 
141 aa  72.8  0.000000000001  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000276178  normal 
 
 
-
 
NC_008322  Shewmr7_1269  Holliday junction resolvase-like protein  28.57 
 
 
141 aa  72.8  0.000000000001  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000329275  normal 
 
 
-
 
NC_008347  Mmar10_1708  Holliday junction resolvase YqgF  34.4 
 
 
151 aa  72.8  0.000000000001  Maricaulis maris MCS10  Bacteria  normal  normal  0.180151 
 
 
-
 
NC_010622  Bphy_2326  Holliday junction resolvase-like protein  33.33 
 
 
151 aa  73.2  0.000000000001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0635951 
 
 
-
 
NC_008577  Shewana3_1199  Holliday junction resolvase-like protein  28.57 
 
 
141 aa  72.8  0.000000000001  Shewanella sp. ANA-3  Bacteria  normal  0.0107111  normal  0.529497 
 
 
-
 
NC_011094  SeSA_A3271  Holliday junction resolvase-like protein  32.81 
 
 
138 aa  72.4  0.000000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.0744312 
 
 
-
 
NC_013525  Tter_0088  Holliday junction resolvase YqgF  33.33 
 
 
149 aa  72.8  0.000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  35.71 
 
 
163 aa  72.4  0.000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5312  Holliday junction resolvase-like protein  31.5 
 
 
145 aa  72  0.000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0190801  normal  0.217295 
 
 
-
 
NC_011083  SeHA_C3336  Holliday junction resolvase-like protein  32.81 
 
 
138 aa  72.4  0.000000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.392173 
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  30.95 
 
 
139 aa  72.4  0.000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0212683 
 
 
-
 
NC_008819  NATL1_08311  endonuclease  37.6 
 
 
144 aa  72.4  0.000000000002  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.0380749  normal  0.23212 
 
 
-
 
NC_011080  SNSL254_A3344  Holliday junction resolvase-like protein  32.81 
 
 
138 aa  72.4  0.000000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.130119  normal  0.247443 
 
 
-
 
NC_011149  SeAg_B3260  Holliday junction resolvase-like protein  32.81 
 
 
138 aa  72.4  0.000000000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.254908  n/a   
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  30.95 
 
 
139 aa  72.4  0.000000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  34.13 
 
 
160 aa  72.8  0.000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal 
 
 
-
 
NC_004347  SO_3347  Holliday junction resolvase-like protein  27.78 
 
 
141 aa  72  0.000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_5038  hypothetical protein  29.92 
 
 
146 aa  72  0.000000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  34.92 
 
 
142 aa  71.6  0.000000000003  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_012912  Dd1591_0500  Holliday junction resolvase-like protein  30.71 
 
 
143 aa  72  0.000000000003  Dickeya zeae Ech1591  Bacteria  normal  0.23587  n/a   
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  33.86 
 
 
146 aa  72  0.000000000003  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3810  Holliday junction resolvase-like protein  33.33 
 
 
146 aa  71.6  0.000000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A3440  Holliday junction resolvase-like protein  32.81 
 
 
138 aa  72  0.000000000003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.00956364 
 
 
-
 
NC_007005  Psyr_0484  Holliday junction resolvase-like protein  29.92 
 
 
146 aa  71.2  0.000000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3713  Holliday junction resolvase-like protein  30.16 
 
 
139 aa  71.2  0.000000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0641904  n/a   
 
 
-
 
NC_009092  Shew_1143  Holliday junction resolvase-like protein  26.98 
 
 
139 aa  71.2  0.000000000004  Shewanella loihica PV-4  Bacteria  normal  0.997205  normal  0.0325702 
 
 
-
 
NC_010681  Bphyt_0869  Holliday junction resolvase-like protein  33.33 
 
 
146 aa  71.2  0.000000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0747835 
 
 
-
 
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