| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0399 |
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| Symbol | |
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| ID | 5108321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 415680 |
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| End bp | 416114 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501615 |
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| Product | Holliday junction resolvase-like protein |
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| Protein accession | YP_001185904 |
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| Protein GI | 146305439 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA AGCCAGTGCG CCTGTTACTG GGCTTCGACT ACGGCACCAA GCAGATCGGC
GTCGCCGTCG GCCAGGTGAT CACCGGCCAG GCCCGTGAAC TGTGCGTGCT CAAGGCGCAG
AACGGCGTGC CGGACTGGAA CCGTGTCGAA GCACTGATCA AGGAATGGCA GCCGGACGCC
GTGGTGGTCG GCCTGCCGCT GAACATGGAC GGCACGCCCA GCGAGATGAG CGCCCGCGCC
GAGAAATTCG CCCGCCGCCT CAACGGCCAC TTCAACCTGC CGGCCTACAC CCACGACGAA
CGCCTGACCA CCTTCGAGGC CAAGGGCCAG CGCCTGCGCG AAGGCCAGAG TGGCGGCTAT
CGCGAGCGCC CGGTCGATGC CATTGCCGCA GCCTTGTTGC TACAAGGCTG GCTAGAGGAA
AACTGCACGC TCTGA
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| Protein sequence | MSDKPVRLLL GFDYGTKQIG VAVGQVITGQ ARELCVLKAQ NGVPDWNRVE ALIKEWQPDA
VVVGLPLNMD GTPSEMSARA EKFARRLNGH FNLPAYTHDE RLTTFEAKGQ RLREGQSGGY
RERPVDAIAA ALLLQGWLEE NCTL
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