Gene Pnuc_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0244 
Symbol 
ID5053333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp243921 
End bp244337 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content47% 
IMG OID640470396 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_001155029 
Protein GI145588432 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.535412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAAT CTATAACGGT GATGGCCTTT GACTATGGAA CGCGCCGAGT AGGGGTTGCA 
GTTGGAAATT CAGTAACGCA ATTAGGGCAA GCTTTAAAAA CAATTGCGGC AGCCAATAGC 
GAGATTCTTT TTCTGGAAGT TGCCTCCCTT CTAAAGGAGT GGCAGCCCGA TCAATTGGTC 
GTTGGTCGCC CTCTTCACCC TGATGGAACC CCCCATGAGA TGACCGCTAA AGCTAGCCGA 
TTTGGAAATC AGCTCCATGG TCACTTTGCC TTGCCAGTTT CTTGGGTTGA TGAGCGCTAT 
ACCTCTGCAA TTTTGGAGGG CGATGCCAAG ATGCAGGACA ATCTAGATGC CCACTCTGCT 
GCGCTTATTT TGGAGCAATA TTTTGCAGAG CAACCAAATA CTAATGAATC TAATTAA
 
Protein sequence
MPKSITVMAF DYGTRRVGVA VGNSVTQLGQ ALKTIAAANS EILFLEVASL LKEWQPDQLV 
VGRPLHPDGT PHEMTAKASR FGNQLHGHFA LPVSWVDERY TSAILEGDAK MQDNLDAHSA 
ALILEQYFAE QPNTNESN