More than 300 homologs were found in PanDaTox collection
for query gene HY04AAS1_0205 on replicon NC_011126
Organism: Hydrogenobaculum sp. Y04AAS1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011126  HY04AAS1_0205  Holliday junction resolvase YqgF  100 
 
 
123 aa  241  3e-63  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  37.4 
 
 
145 aa  82.8  0.000000000000002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_013501  Rmar_0873  Holliday junction resolvase YqgF  36.09 
 
 
145 aa  77.8  0.00000000000005  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  34.59 
 
 
139 aa  75.5  0.0000000000002  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_007614  Nmul_A2479  Holliday junction resolvase-like protein  31.25 
 
 
151 aa  75.9  0.0000000000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  33.07 
 
 
142 aa  75.5  0.0000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  34.59 
 
 
141 aa  74.7  0.0000000000004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1285  Holliday junction resolvase YqgF  31.58 
 
 
145 aa  74.3  0.0000000000005  Psychromonas ingrahamii 37  Bacteria  normal  0.0394867  normal 
 
 
-
 
NC_009092  Shew_1143  Holliday junction resolvase-like protein  30.6 
 
 
139 aa  73.9  0.0000000000006  Shewanella loihica PV-4  Bacteria  normal  0.997205  normal  0.0325702 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  31.06 
 
 
153 aa  73.9  0.0000000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  31.01 
 
 
142 aa  73.2  0.000000000001  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal 
 
 
-
 
NC_009524  PsycPRwf_0143  Holliday junction resolvase YqgF  30.43 
 
 
177 aa  72.8  0.000000000002  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  29.69 
 
 
137 aa  72.4  0.000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.52249 
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  33.33 
 
 
139 aa  72  0.000000000003  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0048  Holliday junction resolvase YqgF  37.23 
 
 
133 aa  71.6  0.000000000003  Dehalococcoides sp. BAV1  Bacteria  normal  0.112526  n/a   
 
 
-
 
NC_009831  Ssed_1236  Holliday junction resolvase-like protein  31.58 
 
 
139 aa  72  0.000000000003  Shewanella sediminis HAW-EB3  Bacteria  normal  0.578906  normal  0.405452 
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  32.56 
 
 
140 aa  71.6  0.000000000004  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  34.09 
 
 
150 aa  71.2  0.000000000004  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_008700  Sama_2473  Holliday junction resolvase-like protein  30.3 
 
 
139 aa  71.2  0.000000000005  Shewanella amazonensis SB2B  Bacteria  normal  0.641283  normal 
 
 
-
 
NC_007954  Sden_2673  Holliday junction resolvase-like protein  30.3 
 
 
141 aa  70.9  0.000000000006  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000201914  n/a   
 
 
-
 
NC_008321  Shewmr4_1198  Holliday junction resolvase-like protein  31.06 
 
 
141 aa  70.9  0.000000000006  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000276178  normal 
 
 
-
 
NC_008322  Shewmr7_1269  Holliday junction resolvase-like protein  31.06 
 
 
141 aa  70.9  0.000000000006  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000329275  normal 
 
 
-
 
NC_008577  Shewana3_1199  Holliday junction resolvase-like protein  31.06 
 
 
141 aa  70.9  0.000000000006  Shewanella sp. ANA-3  Bacteria  normal  0.0107111  normal  0.529497 
 
 
-
 
NC_010622  Bphy_2326  Holliday junction resolvase-like protein  28.68 
 
 
151 aa  70.5  0.000000000007  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0635951 
 
 
-
 
NC_009438  Sputcn32_2682  Holliday junction resolvase-like protein  31.58 
 
 
141 aa  70.5  0.000000000007  Shewanella putrefaciens CN-32  Bacteria  normal  0.0331396  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  28.68 
 
 
146 aa  70.5  0.000000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_014150  Bmur_2800  Holliday junction resolvase YqgF  32.81 
 
 
141 aa  70.1  0.000000000009  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1131  Holliday junction resolvase-like protein  30.3 
 
 
141 aa  70.1  0.000000000009  Shewanella pealeana ATCC 700345  Bacteria  normal  0.111461  n/a   
 
 
-
 
NC_008345  Sfri_2849  Holliday junction resolvase-like protein  31.06 
 
 
139 aa  70.1  0.000000000009  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3347  Holliday junction resolvase-like protein  30.3 
 
 
141 aa  69.7  0.00000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  29.85 
 
 
138 aa  69.7  0.00000000001  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_002936  DET0051  hypothetical protein  36.17 
 
 
133 aa  69.3  0.00000000002  Dehalococcoides ethenogenes 195  Bacteria  normal  0.673741  n/a   
 
 
-
 
NC_010506  Swoo_1336  Holliday junction resolvase-like protein  30.08 
 
 
139 aa  69.3  0.00000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  0.164432  hitchhiker  0.000378103 
 
 
-
 
NC_012791  Vapar_4616  Holliday junction resolvase-like protein  32.5 
 
 
153 aa  68.9  0.00000000002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1790  Holliday junction resolvase YqgF  34.09 
 
 
133 aa  68.6  0.00000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00751815  n/a   
 
 
-
 
NC_007951  Bxe_A3810  Holliday junction resolvase-like protein  29.46 
 
 
146 aa  68.6  0.00000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3713  Holliday junction resolvase-like protein  29.77 
 
 
139 aa  67.8  0.00000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0641904  n/a   
 
 
-
 
NC_011663  Sbal223_1343  Holliday junction resolvase-like protein  30.83 
 
 
141 aa  68.2  0.00000000004  Shewanella baltica OS223  Bacteria  hitchhiker  0.00897927  hitchhiker  0.00000000052642 
 
 
-
 
NC_009665  Shew185_3035  Holliday junction resolvase-like protein  30.83 
 
 
141 aa  68.2  0.00000000004  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000814628  n/a   
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  31.25 
 
 
149 aa  68.2  0.00000000004  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_009052  Sbal_3020  Holliday junction resolvase-like protein  30.83 
 
 
141 aa  68.2  0.00000000004  Shewanella baltica OS155  Bacteria  hitchhiker  0.00101053  n/a   
 
 
-
 
NC_009997  Sbal195_3178  Holliday junction resolvase-like protein  30.83 
 
 
141 aa  68.2  0.00000000004  Shewanella baltica OS195  Bacteria  hitchhiker  0.000555794  normal  0.0157194 
 
 
-
 
NC_010681  Bphyt_0869  Holliday junction resolvase-like protein  28.68 
 
 
146 aa  68.2  0.00000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0747835 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  27.27 
 
 
141 aa  67.8  0.00000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_013552  DhcVS_51  Holliday junction resolvase  36.17 
 
 
133 aa  67.8  0.00000000005  Dehalococcoides sp. VS  Bacteria  normal  0.444327  n/a   
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  31.34 
 
 
137 aa  66.2  0.0000000001  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  31.34 
 
 
137 aa  66.2  0.0000000001  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  31.34 
 
 
137 aa  66.2  0.0000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  31.34 
 
 
137 aa  66.2  0.0000000001  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_006348  BMA1996  Holliday junction resolvase-like protein  27.13 
 
 
146 aa  66.6  0.0000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  0.391575  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  31.34 
 
 
137 aa  66.2  0.0000000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_007204  Psyc_0056  hypothetical protein  29.1 
 
 
177 aa  66.2  0.0000000001  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_3169  Holliday junction resolvase-like protein  27.13 
 
 
146 aa  66.6  0.0000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  31.34 
 
 
137 aa  66.2  0.0000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_008836  BMA10229_A2747  Holliday junction resolvase-like protein  27.13 
 
 
146 aa  66.6  0.0000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0399  Holliday junction resolvase-like protein  29.63 
 
 
144 aa  66.6  0.0000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_0102  Holliday junction resolvase YqgF  31.68 
 
 
199 aa  66.2  0.0000000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0061  Holliday junction resolvase YqgF  29.1 
 
 
173 aa  66.2  0.0000000001  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.498043 
 
 
-
 
NC_009076  BURPS1106A_3147  Holliday junction resolvase-like protein  27.13 
 
 
146 aa  66.6  0.0000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.822464  n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  31.34 
 
 
142 aa  66.6  0.0000000001  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  35.11 
 
 
143 aa  66.6  0.0000000001  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4252  Holliday junction resolvase-like protein  31.85 
 
 
138 aa  66.6  0.0000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.367892  normal  0.370097 
 
 
-
 
NC_009080  BMA10247_1858  Holliday junction resolvase-like protein  27.13 
 
 
146 aa  66.6  0.0000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0917  Holliday junction resolvase-like protein  27.13 
 
 
146 aa  66.6  0.0000000001  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E3381  Holliday junction resolvase-like protein  31.11 
 
 
138 aa  66.2  0.0000000002  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2911  Holliday junction resolvase YqgF  27.27 
 
 
163 aa  65.9  0.0000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.816073  n/a   
 
 
-
 
NC_009801  EcE24377A_3292  Holliday junction resolvase-like protein  31.11 
 
 
138 aa  66.2  0.0000000002  Escherichia coli E24377A  Bacteria  normal  0.684819  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  30.6 
 
 
137 aa  65.9  0.0000000002  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  32.06 
 
 
137 aa  66.2  0.0000000002  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_010498  EcSMS35_3091  Holliday junction resolvase-like protein  31.11 
 
 
138 aa  66.2  0.0000000002  Escherichia coli SMS-3-5  Bacteria  normal  0.372008  decreased coverage  0.00000514809 
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  28.12 
 
 
137 aa  66.2  0.0000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3111  Holliday junction resolvase-like protein  27.13 
 
 
146 aa  65.9  0.0000000002  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0540  Holliday junction resolvase YqgF  27.91 
 
 
156 aa  65.5  0.0000000002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  30.08 
 
 
138 aa  65.9  0.0000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011145  AnaeK_2633  Holliday junction resolvase-like protein  28.91 
 
 
137 aa  65.5  0.0000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.854397  n/a   
 
 
-
 
CP001509  ECD_02779  Holliday junction resolvase-like protein  30.37 
 
 
138 aa  65.1  0.0000000003  Escherichia coli BL21(DE3)  Bacteria  normal  0.358182  n/a   
 
 
-
 
CP001637  EcDH1_0746  Holliday junction resolvase YqgF  30.37 
 
 
138 aa  65.1  0.0000000003  Escherichia coli DH1  Bacteria  normal  0.61838  n/a   
 
 
-
 
NC_010468  EcolC_0765  Holliday junction resolvase-like protein  30.37 
 
 
138 aa  65.1  0.0000000003  Escherichia coli ATCC 8739  Bacteria  normal  0.809741  hitchhiker  0.0000191582 
 
 
-
 
NC_009708  YpsIP31758_0834  Holliday junction resolvase-like protein  27.91 
 
 
140 aa  65.1  0.0000000003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3107  Holliday junction resolvase-like protein  30.37 
 
 
138 aa  65.1  0.0000000003  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3336  Holliday junction resolvase-like protein  31.06 
 
 
138 aa  65.1  0.0000000003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.392173 
 
 
-
 
NC_011149  SeAg_B3260  Holliday junction resolvase-like protein  31.06 
 
 
138 aa  65.1  0.0000000003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.254908  n/a   
 
 
-
 
NC_012912  Dd1591_0500  Holliday junction resolvase-like protein  26.52 
 
 
143 aa  65.1  0.0000000003  Dickeya zeae Ech1591  Bacteria  normal  0.23587  n/a   
 
 
-
 
NC_011094  SeSA_A3271  Holliday junction resolvase-like protein  31.06 
 
 
138 aa  65.1  0.0000000003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.0744312 
 
 
-
 
NC_011080  SNSL254_A3344  Holliday junction resolvase-like protein  31.06 
 
 
138 aa  65.1  0.0000000003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.130119  normal  0.247443 
 
 
-
 
NC_011891  A2cp1_2727  Holliday junction resolvase-like protein  28.91 
 
 
137 aa  65.5  0.0000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  31.3 
 
 
137 aa  65.1  0.0000000003  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_008390  Bamb_0738  Holliday junction resolvase-like protein  25.56 
 
 
149 aa  65.5  0.0000000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.89107  n/a   
 
 
-
 
NC_010465  YPK_0836  Holliday junction resolvase-like protein  27.91 
 
 
140 aa  65.1  0.0000000003  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0695104  n/a   
 
 
-
 
NC_010159  YpAngola_A3340  Holliday junction resolvase-like protein  27.91 
 
 
140 aa  65.1  0.0000000003  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0755  Holliday junction resolvase-like protein  25.56 
 
 
149 aa  65.5  0.0000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.302865  normal  0.26532 
 
 
-
 
NC_012892  B21_02742  hypothetical protein  30.37 
 
 
138 aa  65.1  0.0000000003  Escherichia coli BL21  Bacteria  normal  0.395069  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  32.09 
 
 
140 aa  64.7  0.0000000004  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  29.77 
 
 
150 aa  64.7  0.0000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  32.62 
 
 
158 aa  64.7  0.0000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3440  Holliday junction resolvase-like protein  28.79 
 
 
138 aa  64.3  0.0000000005  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.00956364 
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  37.5 
 
 
163 aa  64.3  0.0000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  30.37 
 
 
146 aa  64.3  0.0000000005  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007799  ECH_0460  hypothetical protein  32.81 
 
 
156 aa  63.9  0.0000000007  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  30.6 
 
 
137 aa  63.9  0.0000000007  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
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