| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4616 |
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| Symbol | |
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| ID | 7972826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4902051 |
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| End bp | 4902512 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795200 |
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| Product | Holliday junction resolvase-like protein |
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| Protein accession | YP_002946487 |
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| Protein GI | 239817577 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCTG CCATGCCAGA CGTTCCCGCC CCTCCCGCCG CTCCCTCCGC CGCCCCTGCT
GCCGTTGCCG TTCCCCCCCA CTTCCAGAGC TTCCTGGCCT TCGACTTCGG CCTGAAGCGC
ACCGGCGTCG CCAGCGGCAA CCGCCTGCTC GGCGCCGCGA CGCCGCAGGC CACCATCAAG
GCCGAGGGCG ATGCCCGCTT TGCGCAGGTG GAAGCCCGCA TCAAGGAATG GCAGCCCGAC
GCGCTGGTGG TCGGTGTGCC GTACCACCCC GACGGCGCCC CGCACGAGAA CACCCGCCGC
GCGCAGAAGT TCGCGCGGCA ATTGCGTGGC CGTTTCAATC TCCAGGTGTT CGAGGTCGAC
GAGCGCTACA GCACGACCGA GGCGCTGGCC TCCGGCGCGC GCGATGCCGA TGCGGCCTCG
GCCTGCATCA TCCTGGAGCA ATTTTTGAGG AGCATCCCTT GA
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| Protein sequence | MAAAMPDVPA PPAAPSAAPA AVAVPPHFQS FLAFDFGLKR TGVASGNRLL GAATPQATIK
AEGDARFAQV EARIKEWQPD ALVVGVPYHP DGAPHENTRR AQKFARQLRG RFNLQVFEVD
ERYSTTEALA SGARDADAAS ACIILEQFLR SIP
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