More than 300 homologs were found in PanDaTox collection
for query gene DhcVS_51 on replicon NC_013552
Organism: Dehalococcoides sp. VS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013552  DhcVS_51  Holliday junction resolvase  100 
 
 
133 aa  271  3e-72  Dehalococcoides sp. VS  Bacteria  normal  0.444327  n/a   
 
 
-
 
NC_002936  DET0051  hypothetical protein  96.99 
 
 
133 aa  252  1.0000000000000001e-66  Dehalococcoides ethenogenes 195  Bacteria  normal  0.673741  n/a   
 
 
-
 
NC_009455  DehaBAV1_0048  Holliday junction resolvase YqgF  87.97 
 
 
133 aa  232  1.0000000000000001e-60  Dehalococcoides sp. BAV1  Bacteria  normal  0.112526  n/a   
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  44.44 
 
 
141 aa  99  2e-20  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal 
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  41.27 
 
 
139 aa  96.3  1e-19  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  40.48 
 
 
146 aa  94.7  4e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  36.57 
 
 
146 aa  89.7  1e-17  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  37.01 
 
 
139 aa  88.6  2e-17  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  41.41 
 
 
137 aa  87.4  6e-17  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  40.62 
 
 
137 aa  86.7  9e-17  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  40.62 
 
 
137 aa  86.7  9e-17  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  38.17 
 
 
158 aa  85.1  3e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1976  Holliday junction resolvase YqgF  38.97 
 
 
161 aa  85.1  3e-16  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.133397  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  40.16 
 
 
140 aa  84.7  4e-16  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  42.19 
 
 
137 aa  84.3  5e-16  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  38.35 
 
 
149 aa  84  7e-16  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  36.72 
 
 
140 aa  82.8  0.000000000000001  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  41.86 
 
 
139 aa  80.9  0.000000000000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000233904 
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  37.5 
 
 
149 aa  79.3  0.00000000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  39.68 
 
 
145 aa  79.7  0.00000000000001  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  32.54 
 
 
138 aa  79  0.00000000000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  35.71 
 
 
141 aa  79  0.00000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  34.4 
 
 
141 aa  78.2  0.00000000000004  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1820  Holliday junction resolvase YqgF  39.1 
 
 
153 aa  78.2  0.00000000000004  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0000610168 
 
 
-
 
NC_011989  Avi_1768  Holliday junction resolvase-like protein  34.92 
 
 
158 aa  77.4  0.00000000000005  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG2090  Holliday junction resolvase-like protein  35.11 
 
 
136 aa  77.4  0.00000000000006  Streptococcus agalactiae 2603V/R  Bacteria  hitchhiker  0.000724166  n/a   
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  39.37 
 
 
182 aa  77.4  0.00000000000006  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  34.88 
 
 
139 aa  76.3  0.0000000000001  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  31.85 
 
 
150 aa  76.6  0.0000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal 
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  37.8 
 
 
142 aa  75.5  0.0000000000002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  39.37 
 
 
141 aa  75.5  0.0000000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  34.65 
 
 
151 aa  75.9  0.0000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  35.94 
 
 
137 aa  75.1  0.0000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_009380  Strop_1829  Holliday junction resolvase YqgF  39.1 
 
 
153 aa  75.1  0.0000000000003  Salinispora tropica CNB-440  Bacteria  normal  0.0551936  normal 
 
 
-
 
NC_010159  YpAngola_A3340  Holliday junction resolvase-like protein  33.86 
 
 
140 aa  75.1  0.0000000000003  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  38.28 
 
 
137 aa  75.1  0.0000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_010465  YPK_0836  Holliday junction resolvase-like protein  33.86 
 
 
140 aa  75.1  0.0000000000003  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0695104  n/a   
 
 
-
 
NC_009708  YpsIP31758_0834  Holliday junction resolvase-like protein  33.86 
 
 
140 aa  75.1  0.0000000000003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  34.65 
 
 
163 aa  75.1  0.0000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_008347  Mmar10_1708  Holliday junction resolvase YqgF  38.4 
 
 
151 aa  74.7  0.0000000000004  Maricaulis maris MCS10  Bacteria  normal  normal  0.180151 
 
 
-
 
NC_008686  Pden_0510  Holliday junction resolvase-like protein  39.53 
 
 
158 aa  74.3  0.0000000000005  Paracoccus denitrificans PD1222  Bacteria  normal  0.556579  normal 
 
 
-
 
NC_007954  Sden_2673  Holliday junction resolvase-like protein  32.8 
 
 
141 aa  73.9  0.0000000000006  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000201914  n/a   
 
 
-
 
NC_009428  Rsph17025_1879  Holliday junction resolvase-like protein  36.51 
 
 
160 aa  73.9  0.0000000000007  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.620593  normal 
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  37.69 
 
 
138 aa  73.9  0.0000000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  32.54 
 
 
142 aa  73.6  0.0000000000008  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  37.8 
 
 
222 aa  72.8  0.000000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_012880  Dd703_0543  Holliday junction resolvase-like protein  33.33 
 
 
139 aa  73.6  0.000000000001  Dickeya dadantii Ech703  Bacteria  normal  0.0491649  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  36.72 
 
 
137 aa  72.8  0.000000000001  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal 
 
 
-
 
NC_013525  Tter_0088  Holliday junction resolvase YqgF  34.11 
 
 
149 aa  73.2  0.000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007335  PMN2A_0199  Holliday junction resolvase YqgF  36.8 
 
 
144 aa  72.8  0.000000000001  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.102311  n/a   
 
 
-
 
NC_013203  Apar_0458  Holliday junction resolvase YqgF  32.54 
 
 
140 aa  73.2  0.000000000001  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  34.65 
 
 
151 aa  72.8  0.000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal 
 
 
-
 
NC_007493  RSP_2684  Holliday junction resolvase-like protein  35.43 
 
 
160 aa  73.2  0.000000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.173322  n/a   
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  38.76 
 
 
141 aa  72.8  0.000000000001  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal 
 
 
-
 
NC_009049  Rsph17029_1342  Holliday junction resolvase-like protein  35.43 
 
 
160 aa  73.2  0.000000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  decreased coverage  0.00888056  normal  0.184568 
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  33.33 
 
 
139 aa  72  0.000000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009484  Acry_0873  Holliday junction resolvase YqgF  32.31 
 
 
158 aa  72.4  0.000000000002  Acidiphilium cryptum JF-5  Bacteria  normal  0.205729  n/a   
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  37.5 
 
 
137 aa  72.4  0.000000000002  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  37.5 
 
 
137 aa  72.4  0.000000000002  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  37.5 
 
 
137 aa  72.4  0.000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  37.5 
 
 
137 aa  72.4  0.000000000002  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  37.5 
 
 
137 aa  72.4  0.000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_011757  Mchl_3643  Holliday junction resolvase YqgF  38.89 
 
 
165 aa  72.4  0.000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.724014 
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  37.5 
 
 
137 aa  72.4  0.000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_010172  Mext_3319  Holliday junction resolvase YqgF  38.89 
 
 
160 aa  72.4  0.000000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.587532  normal  0.657687 
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  35.43 
 
 
141 aa  72  0.000000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.140554 
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  36.72 
 
 
137 aa  72.4  0.000000000002  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  35.16 
 
 
150 aa  72.4  0.000000000002  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  32.03 
 
 
143 aa  72.4  0.000000000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0475  Holliday junction resolvase YqgF  38.1 
 
 
170 aa  72.4  0.000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.437798  normal  0.0955854 
 
 
-
 
NC_008819  NATL1_08311  endonuclease  36.8 
 
 
144 aa  72.4  0.000000000002  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.0380749  normal  0.23212 
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  33.33 
 
 
139 aa  72  0.000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.0212683 
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  37.5 
 
 
137 aa  72.4  0.000000000002  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_011126  HY04AAS1_0205  Holliday junction resolvase YqgF  33.88 
 
 
123 aa  71.6  0.000000000003  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  35.61 
 
 
147 aa  71.2  0.000000000004  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  34.38 
 
 
138 aa  71.2  0.000000000004  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_009832  Spro_4028  Holliday junction resolvase-like protein  34.92 
 
 
140 aa  70.9  0.000000000005  Serratia proteamaculans 568  Bacteria  normal  0.290268  hitchhiker  0.00115108 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  32.06 
 
 
142 aa  70.9  0.000000000006  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal 
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  35.43 
 
 
146 aa  70.9  0.000000000006  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  34.65 
 
 
158 aa  70.5  0.000000000006  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
CP001509  ECD_02779  Holliday junction resolvase-like protein  32.28 
 
 
138 aa  70.5  0.000000000007  Escherichia coli BL21(DE3)  Bacteria  normal  0.358182  n/a   
 
 
-
 
CP001637  EcDH1_0746  Holliday junction resolvase YqgF  32.28 
 
 
138 aa  70.5  0.000000000007  Escherichia coli DH1  Bacteria  normal  0.61838  n/a   
 
 
-
 
NC_009800  EcHS_A3107  Holliday junction resolvase-like protein  32.28 
 
 
138 aa  70.5  0.000000000007  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02742  hypothetical protein  32.28 
 
 
138 aa  70.5  0.000000000007  Escherichia coli BL21  Bacteria  normal  0.395069  n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  34.92 
 
 
142 aa  70.5  0.000000000007  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_010468  EcolC_0765  Holliday junction resolvase-like protein  32.28 
 
 
138 aa  70.5  0.000000000007  Escherichia coli ATCC 8739  Bacteria  normal  0.809741  hitchhiker  0.0000191582 
 
 
-
 
NC_008321  Shewmr4_1198  Holliday junction resolvase-like protein  31.75 
 
 
141 aa  70.5  0.000000000007  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000276178  normal 
 
 
-
 
NC_008322  Shewmr7_1269  Holliday junction resolvase-like protein  31.75 
 
 
141 aa  70.5  0.000000000007  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000329275  normal 
 
 
-
 
NC_008577  Shewana3_1199  Holliday junction resolvase-like protein  31.75 
 
 
141 aa  70.5  0.000000000007  Shewanella sp. ANA-3  Bacteria  normal  0.0107111  normal  0.529497 
 
 
-
 
NC_009801  EcE24377A_3292  Holliday junction resolvase-like protein  32.28 
 
 
138 aa  70.5  0.000000000008  Escherichia coli E24377A  Bacteria  normal  0.684819  n/a   
 
 
-
 
NC_011353  ECH74115_4252  Holliday junction resolvase-like protein  32.28 
 
 
138 aa  70.5  0.000000000008  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.367892  normal  0.370097 
 
 
-
 
NC_010622  Bphy_2326  Holliday junction resolvase-like protein  34.68 
 
 
151 aa  70.5  0.000000000008  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0635951 
 
 
-
 
NC_007802  Jann_2181  Holliday junction resolvase YqgF  36.15 
 
 
145 aa  70.1  0.000000000008  Jannaschia sp. CCS1  Bacteria  normal  0.659798  normal 
 
 
-
 
NC_010498  EcSMS35_3091  Holliday junction resolvase-like protein  32.28 
 
 
138 aa  70.5  0.000000000008  Escherichia coli SMS-3-5  Bacteria  normal  0.372008  decreased coverage  0.00000514809 
 
 
-
 
NC_010658  SbBS512_E3381  Holliday junction resolvase-like protein  32.28 
 
 
138 aa  70.5  0.000000000008  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  34.13 
 
 
137 aa  70.5  0.000000000008  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.52249 
 
 
-
 
NC_011894  Mnod_3314  Holliday junction resolvase YqgF  35.71 
 
 
163 aa  70.1  0.000000000009  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1143  Holliday junction resolvase-like protein  30.16 
 
 
139 aa  70.1  0.000000000009  Shewanella loihica PV-4  Bacteria  normal  0.997205  normal  0.0325702 
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  38.06 
 
 
151 aa  70.1  0.00000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal 
 
 
-
 
NC_004347  SO_3347  Holliday junction resolvase-like protein  30.16 
 
 
141 aa  69.3  0.00000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
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