182 homologs were found in PanDaTox collection
for query gene Tmel_0300 on replicon NC_009616
Organism: Thermosipho melanesiensis BI429



Page 1 of 2    << first  < prev  1  2    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009616  Tmel_0300  Holliday junction resolvase YqgF  100 
 
 		 202 aa  407  1e-113  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_009718  Fnod_0335  Holliday junction resolvase YqgF  47.46 
 
 		 226 aa  155  4e-37  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010483  TRQ2_1208  Holliday junction resolvase YqgF  34.43 
 
 		 206 aa  108  8.000000000000001e-23  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.000404516  n/a   
 
 
-
 
NC_009486  Tpet_1247  Holliday junction resolvase YqgF  34.43 
 
 		 206 aa  107  8.000000000000001e-23  Thermotoga petrophila RKU-1  Bacteria  decreased coverage  0.00416078  n/a   
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  31.11 
 
 		 146 aa  60.1  0.00000002  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  29.2 
 
 		 141 aa  60.1  0.00000002  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal  1 
 
 
-
 
NC_004578  PSPTO_5038  hypothetical protein  31.65 
 
 		 146 aa  59.3  0.00000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_4996  Holliday junction resolvase-like protein  31.91 
 
 		 141 aa  59.3  0.00000004  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_0484  Holliday junction resolvase-like protein  31.65 
 
 		 146 aa  59.3  0.00000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_4870  Holliday junction resolvase-like protein  31.91 
 
 		 141 aa  59.3  0.00000004  Pseudomonas putida F1  Bacteria  normal  1  normal  0.0143218 
 
 
-
 
NC_010322  PputGB1_5046  Holliday junction resolvase-like protein  31.91 
 
 		 141 aa  59.3  0.00000004  Pseudomonas putida GB-1  Bacteria  normal  0.433304  normal  1 
 
 
-
 
NC_010501  PputW619_0468  Holliday junction resolvase-like protein  31.91 
 
 		 141 aa  58.9  0.00000005  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_0059  Holliday junction resolvase-like protein  28.36 
 
 		 148 aa  57.8  0.0000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  34.06 
 
 		 139 aa  57  0.0000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.0000233904 
 
 
-
 
NC_007204  Psyc_0056  hypothetical protein  38.1 
 
 		 177 aa  56.2  0.0000003  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  33.09 
 
 		 144 aa  56.2  0.0000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_007969  Pcryo_0061  Holliday junction resolvase YqgF  38.1 
 
 		 173 aa  55.8  0.0000004  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  0.498043 
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  34.11 
 
 		 141 aa  55.8  0.0000004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_010159  YpAngola_A3340  Holliday junction resolvase-like protein  36.46 
 
 		 140 aa  55.8  0.0000005  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010465  YPK_0836  Holliday junction resolvase-like protein  36.46 
 
 		 140 aa  55.8  0.0000005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0695104  n/a   
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  32.09 
 
 		 142 aa  55.5  0.0000005  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_009708  YpsIP31758_0834  Holliday junction resolvase-like protein  36.46 
 
 		 140 aa  55.8  0.0000005  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_1378  Holliday junction resolvase-like protein  31.97 
 
 		 156 aa  55.5  0.0000006  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008309  HS_0010  Holliday junction resolvase-like protein  32.12 
 
 		 141 aa  55.5  0.0000006  Haemophilus somnus 129PT  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_3347  Holliday junction resolvase-like protein  30.3 
 
 		 141 aa  55.1  0.0000007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008340  Mlg_0348  Holliday junction resolvase YqgF  32.65 
 
 		 144 aa  55.1  0.0000007  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.180305  normal  1 
 
 
-
 
NC_009901  Spea_1131  Holliday junction resolvase-like protein  31.82 
 
 		 141 aa  55.1  0.0000007  Shewanella pealeana ATCC 700345  Bacteria  normal  0.111461  n/a   
 
 
-
 
NC_010003  Pmob_0336  Holliday junction resolvase YqgF  31.68 
 
 		 230 aa  55.1  0.0000008  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_03140  Holliday junction resolvase-like protein  32.99 
 
 		 142 aa  54.3  0.000001  Azotobacter vinelandii DJ  Bacteria  normal  0.567501  n/a   
 
 
-
 
NC_008463  PA14_05280  Holliday junction resolvase-like protein  31.36 
 
 		 144 aa  53.9  0.000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009524  PsycPRwf_0143  Holliday junction resolvase YqgF  28.97 
 
 		 177 aa  54.3  0.000001  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_0504  Holliday junction resolvase-like protein  31.36 
 
 		 144 aa  53.9  0.000001  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  27.94 
 
 		 146 aa  54.3  0.000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_012917  PC1_3713  Holliday junction resolvase-like protein  35.42 
 
 		 139 aa  53.5  0.000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0641904  n/a   
 
 
-
 
NC_011992  Dtpsy_2895  Holliday junction resolvase-like protein  34.04 
 
 		 139 aa  53.5  0.000002  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_011126  HY04AAS1_0205  Holliday junction resolvase YqgF  35.25 
 
 		 123 aa  52.8  0.000003  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_5312  Holliday junction resolvase-like protein  30.22 
 
 		 145 aa  53.1  0.000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0190801  normal  0.217295 
 
 
-
 
NC_008321  Shewmr4_1198  Holliday junction resolvase-like protein  31.82 
 
 		 141 aa  53.1  0.000003  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000276178  normal  1 
 
 
-
 
NC_008322  Shewmr7_1269  Holliday junction resolvase-like protein  31.82 
 
 		 141 aa  53.1  0.000003  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000329275  normal  1 
 
 
-
 
NC_008577  Shewana3_1199  Holliday junction resolvase-like protein  31.82 
 
 		 141 aa  53.1  0.000003  Shewanella sp. ANA-3  Bacteria  normal  0.0107111  normal  0.529497 
 
 
-
 
NC_008782  Ajs_3572  Holliday junction resolvase-like protein  34.04 
 
 		 139 aa  53.1  0.000003  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.417353 
 
 
-
 
NC_009438  Sputcn32_2682  Holliday junction resolvase-like protein  31.06 
 
 		 141 aa  52.8  0.000003  Shewanella putrefaciens CN-32  Bacteria  normal  0.0331396  n/a   
 
 
-
 
NC_009439  Pmen_0399  Holliday junction resolvase-like protein  28.57 
 
 		 144 aa  53.1  0.000003  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014230  CA2559_06155  Holliday junction resolvase-like protein  31.3 
 
 		 135 aa  52.8  0.000004  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_0568  Holliday junction resolvase-like protein  30.51 
 
 		 143 aa  52.4  0.000004  Ralstonia pickettii 12D  Bacteria  normal  0.619752  normal  1 
 
 
-
 
NC_012791  Vapar_4616  Holliday junction resolvase-like protein  33.64 
 
 		 153 aa  52.4  0.000005  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_0906  Holliday junction resolvase-like protein  32.32 
 
 		 155 aa  52.4  0.000005  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.167999  n/a   
 
 
-
 
NC_009832  Spro_4028  Holliday junction resolvase-like protein  34.38 
 
 		 140 aa  52  0.000005  Serratia proteamaculans 568  Bacteria  normal  0.290268  hitchhiker  0.00115108 
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  33.59 
 
 		 137 aa  52  0.000006  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  33.59 
 
 		 137 aa  51.6  0.000007  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  33.59 
 
 		 137 aa  51.6  0.000008  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  33.59 
 
 		 137 aa  51.6  0.000008  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  33.59 
 
 		 137 aa  51.6  0.000008  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  33.59 
 
 		 137 aa  51.6  0.000008  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  33.59 
 
 		 137 aa  51.6  0.000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_012880  Dd703_0543  Holliday junction resolvase-like protein  30.6 
 
 		 139 aa  51.6  0.000008  Dickeya dadantii Ech703  Bacteria  normal  0.0491649  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  33.59 
 
 		 137 aa  51.6  0.000008  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  28.47 
 
 		 142 aa  51.6  0.000008  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal  1 
 
 
-
 
NC_013421  Pecwa_3911  Holliday junction resolvase-like protein  34.38 
 
 		 139 aa  51.6  0.000009  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0877728  n/a   
 
 
-
 
NC_012912  Dd1591_0500  Holliday junction resolvase-like protein  32.29 
 
 		 143 aa  50.8  0.00001  Dickeya zeae Ech1591  Bacteria  normal  0.23587  n/a   
 
 
-
 
NC_011080  SNSL254_A3344  Holliday junction resolvase-like protein  34.38 
 
 		 138 aa  50.8  0.00001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.130119  normal  0.247443 
 
 
-
 
NC_011149  SeAg_B3260  Holliday junction resolvase-like protein  34.38 
 
 		 138 aa  51.2  0.00001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.254908  n/a   
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  33.59 
 
 		 149 aa  51.2  0.00001  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_011083  SeHA_C3336  Holliday junction resolvase-like protein  34.38 
 
 		 138 aa  51.2  0.00001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.392173 
 
 
-
 
NC_011094  SeSA_A3271  Holliday junction resolvase-like protein  34.38 
 
 		 138 aa  51.2  0.00001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.0744312 
 
 
-
 
NC_009831  Ssed_1236  Holliday junction resolvase-like protein  30.3 
 
 		 139 aa  50.8  0.00001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.578906  normal  0.405452 
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  28.68 
 
 		 140 aa  50.4  0.00002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  32.82 
 
 		 137 aa  50.4  0.00002  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal  1 
 
 
-
 
NC_007912  Sde_3638  Holliday junction resolvase-like protein  29.46 
 
 		 142 aa  50.1  0.00002  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011206  Lferr_2668  Holliday junction resolvase YqgF  27.69 
 
 		 143 aa  50.4  0.00002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.933138  normal  1 
 
 
-
 
NC_014212  Mesil_0224  Holliday junction resolvase YqgF  28.87 
 
 		 135 aa  50.4  0.00002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.776353  normal  0.0108713 
 
 
-
 
NC_011761  AFE_3061  hypothetical protein  27.69 
 
 		 143 aa  50.4  0.00002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_1143  Holliday junction resolvase-like protein  30.77 
 
 		 139 aa  50.1  0.00002  Shewanella loihica PV-4  Bacteria  normal  0.997205  normal  0.0325702 
 
 
-
 
NC_010682  Rpic_0620  Holliday junction resolvase-like protein  30.51 
 
 		 143 aa  50.4  0.00002  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  30.22 
 
 		 137 aa  50.4  0.00002  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_002950  PG2202  Holliday junction resolvase-like protein  30.08 
 
 		 138 aa  49.7  0.00003  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_010117  COXBURSA331_A2220  Holliday junction resolvase-like protein  31.58 
 
 		 141 aa  49.7  0.00003  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.0000000031992  n/a   
 
 
-
 
NC_007954  Sden_2673  Holliday junction resolvase-like protein  29.55 
 
 		 141 aa  49.7  0.00003  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000201914  n/a   
 
 
-
 
NC_011205  SeD_A3440  Holliday junction resolvase-like protein  34.38 
 
 		 138 aa  50.1  0.00003  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.00956364 
 
 
-
 
NC_008345  Sfri_2849  Holliday junction resolvase-like protein  31.06 
 
 		 139 aa  49.7  0.00003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_2528  Holliday junction resolvase-like protein  31.65 
 
 		 138 aa  50.1  0.00003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.551236  n/a   
 
 
-
 
NC_009727  CBUD_2194  Holliday junction resolvase-like protein  31.58 
 
 		 141 aa  49.7  0.00003  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.401443  n/a   
 
 
-
 
CP001509  ECD_02779  Holliday junction resolvase-like protein  33.33 
 
 		 138 aa  49.3  0.00004  Escherichia coli BL21(DE3)  Bacteria  normal  0.358182  n/a   
 
 
-
 
CP001637  EcDH1_0746  Holliday junction resolvase YqgF  33.33 
 
 		 138 aa  49.3  0.00004  Escherichia coli DH1  Bacteria  normal  0.61838  n/a   
 
 
-
 
NC_010658  SbBS512_E3381  Holliday junction resolvase-like protein  33.33 
 
 		 138 aa  49.3  0.00004  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_0765  Holliday junction resolvase-like protein  33.33 
 
 		 138 aa  49.3  0.00004  Escherichia coli ATCC 8739  Bacteria  normal  0.809741  hitchhiker  0.0000191582 
 
 
-
 
NC_012892  B21_02742  hypothetical protein  33.33 
 
 		 138 aa  49.3  0.00004  Escherichia coli BL21  Bacteria  normal  0.395069  n/a   
 
 
-
 
NC_010498  EcSMS35_3091  Holliday junction resolvase-like protein  33.33 
 
 		 138 aa  49.3  0.00004  Escherichia coli SMS-3-5  Bacteria  normal  0.372008  decreased coverage  0.00000514809 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  28.68 
 
 		 153 aa  49.3  0.00004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_011353  ECH74115_4252  Holliday junction resolvase-like protein  33.33 
 
 		 138 aa  49.3  0.00004  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.367892  normal  0.370097 
 
 
-
 
NC_013162  Coch_1395  Holliday junction resolvase YqgF  33.59 
 
 		 143 aa  49.3  0.00004  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_3035  Holliday junction resolvase YqgF  29.17 
 
 		 133 aa  49.3  0.00004  Conexibacter woesei DSM 14684  Bacteria  normal  0.0101605  normal  0.0662243 
 
 
-
 
NC_009800  EcHS_A3107  Holliday junction resolvase-like protein  33.33 
 
 		 138 aa  49.3  0.00004  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_3292  Holliday junction resolvase-like protein  33.33 
 
 		 138 aa  49.3  0.00004  Escherichia coli E24377A  Bacteria  normal  0.684819  n/a   
 
 
-
 
NC_008060  Bcen_0383  Holliday junction resolvase-like protein  29.1 
 
 		 149 aa  48.9  0.00005  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_3178  Holliday junction resolvase-like protein  30.3 
 
 		 141 aa  48.9  0.00005  Shewanella baltica OS195  Bacteria  hitchhiker  0.000555794  normal  0.0157194 
 
 
-
 
NC_008542  Bcen2424_0865  Holliday junction resolvase-like protein  29.1 
 
 		 149 aa  48.9  0.00005  Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_0908  Holliday junction resolvase-like protein  31.31 
 
 		 150 aa  48.9  0.00005  Acidovorax citrulli AAC00-1  Bacteria  normal  0.421981  normal  0.397145 
 
 
-
 
NC_009052  Sbal_3020  Holliday junction resolvase-like protein  30.3 
 
 		 141 aa  48.9  0.00005  Shewanella baltica OS155  Bacteria  hitchhiker  0.00101053  n/a   
 
 
-
 
NC_009665  Shew185_3035  Holliday junction resolvase-like protein  30.3 
 
 		 141 aa  48.9  0.00005  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000814628  n/a   
 
 
-
 
Page 1 of 2    << first  < prev  1  2    next >  last >>