107 homologs were found in PanDaTox collection
for query gene Pmob_0336 on replicon NC_010003
Organism: Petrotoga mobilis SJ95



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010003  Pmob_0336  Holliday junction resolvase YqgF  100 
 
 		 230 aa  462  1e-129  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
-
 
NC_009486  Tpet_1247  Holliday junction resolvase YqgF  30.87 
 
 		 206 aa  76.6  0.0000000000003  Thermotoga petrophila RKU-1  Bacteria  decreased coverage  0.00416078  n/a   
 
 
-
 
NC_010483  TRQ2_1208  Holliday junction resolvase YqgF  29.57 
 
 		 206 aa  75.1  0.0000000000008  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.000404516  n/a   
 
 
-
 
NC_009718  Fnod_0335  Holliday junction resolvase YqgF  27.93 
 
 		 226 aa  68.6  0.00000000007  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_3347  Holliday junction resolvase-like protein  28.79 
 
 		 141 aa  56.2  0.0000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_1336  Holliday junction resolvase-like protein  31.06 
 
 		 139 aa  56.2  0.0000004  Shewanella woodyi ATCC 51908  Bacteria  normal  0.164432  hitchhiker  0.000378103 
 
 
-
 
NC_009831  Ssed_1236  Holliday junction resolvase-like protein  29.2 
 
 		 139 aa  55.5  0.0000007  Shewanella sediminis HAW-EB3  Bacteria  normal  0.578906  normal  0.405452 
 
 
-
 
NC_009092  Shew_1143  Holliday junction resolvase-like protein  27.94 
 
 		 139 aa  55.1  0.000001  Shewanella loihica PV-4  Bacteria  normal  0.997205  normal  0.0325702 
 
 
-
 
NC_009616  Tmel_0300  Holliday junction resolvase YqgF  31.68 
 
 		 202 aa  55.1  0.000001  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_1131  Holliday junction resolvase-like protein  29.77 
 
 		 141 aa  53.5  0.000002  Shewanella pealeana ATCC 700345  Bacteria  normal  0.111461  n/a   
 
 
-
 
NC_008751  Dvul_0307  Holliday junction resolvase YqgF  24.65 
 
 		 142 aa  53.5  0.000003  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_0314  Holliday junction resolvase YqgF  24.82 
 
 		 144 aa  51.6  0.000009  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  26.62 
 
 		 146 aa  51.6  0.000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  28.37 
 
 		 169 aa  51.2  0.00001  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008321  Shewmr4_1198  Holliday junction resolvase-like protein  28.03 
 
 		 141 aa  51.2  0.00001  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000276178  normal  1 
 
 
-
 
NC_008322  Shewmr7_1269  Holliday junction resolvase-like protein  28.03 
 
 		 141 aa  51.2  0.00001  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000329275  normal  1 
 
 
-
 
NC_008345  Sfri_2849  Holliday junction resolvase-like protein  28.99 
 
 		 139 aa  51.2  0.00001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_1199  Holliday junction resolvase-like protein  28.03 
 
 		 141 aa  51.2  0.00001  Shewanella sp. ANA-3  Bacteria  normal  0.0107111  normal  0.529497 
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  28.37 
 
 		 169 aa  51.2  0.00001  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.345644 
 
 
-
 
NC_009438  Sputcn32_2682  Holliday junction resolvase-like protein  28.89 
 
 		 141 aa  51.6  0.00001  Shewanella putrefaciens CN-32  Bacteria  normal  0.0331396  n/a   
 
 
-
 
NC_009719  Plav_2841  Holliday junction resolvase YqgF  34.29 
 
 		 182 aa  51.2  0.00001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.636675  normal  0.911101 
 
 
-
 
NC_013173  Dbac_1790  Holliday junction resolvase YqgF  29.1 
 
 		 133 aa  51.2  0.00001  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00751815  n/a   
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  26.24 
 
 		 142 aa  51.2  0.00001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_1285  Holliday junction resolvase YqgF  28.03 
 
 		 145 aa  50.8  0.00002  Psychromonas ingrahamii 37  Bacteria  normal  0.0394867  normal  1 
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  34.09 
 
 		 151 aa  50.4  0.00002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal  1 
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  28.37 
 
 		 169 aa  50.1  0.00003  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.0472019 
 
 
-
 
NC_009801  EcE24377A_3292  Holliday junction resolvase-like protein  27.91 
 
 		 138 aa  50.1  0.00003  Escherichia coli E24377A  Bacteria  normal  0.684819  n/a   
 
 
-
 
NC_010498  EcSMS35_3091  Holliday junction resolvase-like protein  27.91 
 
 		 138 aa  50.1  0.00003  Escherichia coli SMS-3-5  Bacteria  normal  0.372008  decreased coverage  0.00000514809 
 
 
-
 
NC_010658  SbBS512_E3381  Holliday junction resolvase-like protein  27.91 
 
 		 138 aa  50.1  0.00003  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_4252  Holliday junction resolvase-like protein  27.91 
 
 		 138 aa  50.1  0.00003  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.367892  normal  0.370097 
 
 
-
 
NC_011883  Ddes_0031  Holliday junction resolvase YqgF  24.62 
 
 		 140 aa  50.1  0.00003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1251  Holliday junction resolvase-like protein  24.46 
 
 		 148 aa  49.7  0.00004  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_2673  Holliday junction resolvase-like protein  27.41 
 
 		 141 aa  49.7  0.00004  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000201914  n/a   
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  27.69 
 
 		 175 aa  49.7  0.00004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.454353 
 
 
-
 
CP001509  ECD_02779  Holliday junction resolvase-like protein  27.13 
 
 		 138 aa  48.9  0.00006  Escherichia coli BL21(DE3)  Bacteria  normal  0.358182  n/a   
 
 
-
 
CP001637  EcDH1_0746  Holliday junction resolvase YqgF  27.13 
 
 		 138 aa  48.9  0.00006  Escherichia coli DH1  Bacteria  normal  0.61838  n/a   
 
 
-
 
NC_009052  Sbal_3020  Holliday junction resolvase-like protein  28.15 
 
 		 141 aa  49.3  0.00006  Shewanella baltica OS155  Bacteria  hitchhiker  0.00101053  n/a   
 
 
-
 
NC_009484  Acry_0873  Holliday junction resolvase YqgF  27.18 
 
 		 158 aa  49.3  0.00006  Acidiphilium cryptum JF-5  Bacteria  normal  0.205729  n/a   
 
 
-
 
NC_009665  Shew185_3035  Holliday junction resolvase-like protein  28.15 
 
 		 141 aa  49.3  0.00006  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000814628  n/a   
 
 
-
 
NC_009800  EcHS_A3107  Holliday junction resolvase-like protein  27.13 
 
 		 138 aa  48.9  0.00006  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_3178  Holliday junction resolvase-like protein  28.15 
 
 		 141 aa  49.3  0.00006  Shewanella baltica OS195  Bacteria  hitchhiker  0.000555794  normal  0.0157194 
 
 
-
 
NC_010468  EcolC_0765  Holliday junction resolvase-like protein  27.13 
 
 		 138 aa  48.9  0.00006  Escherichia coli ATCC 8739  Bacteria  normal  0.809741  hitchhiker  0.0000191582 
 
 
-
 
NC_011663  Sbal223_1343  Holliday junction resolvase-like protein  28.15 
 
 		 141 aa  49.3  0.00006  Shewanella baltica OS223  Bacteria  hitchhiker  0.00897927  hitchhiker  0.00000000052642 
 
 
-
 
NC_012892  B21_02742  hypothetical protein  27.13 
 
 		 138 aa  48.9  0.00006  Escherichia coli BL21  Bacteria  normal  0.395069  n/a   
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  28.46 
 
 		 142 aa  48.9  0.00007  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_012917  PC1_3713  Holliday junction resolvase-like protein  24.82 
 
 		 139 aa  48.9  0.00007  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0641904  n/a   
 
 
-
 
NC_013131  Caci_2379  Holliday junction resolvase-like protein  30.37 
 
 		 171 aa  48.9  0.00007  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008309  HS_0010  Holliday junction resolvase-like protein  24.44 
 
 		 141 aa  48.5  0.00008  Haemophilus somnus 129PT  Bacteria  normal  1  n/a   
 
 
-
 
NC_011080  SNSL254_A3344  Holliday junction resolvase-like protein  27.91 
 
 		 138 aa  48.5  0.00009  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.130119  normal  0.247443 
 
 
-
 
NC_011083  SeHA_C3336  Holliday junction resolvase-like protein  27.91 
 
 		 138 aa  48.5  0.00009  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.392173 
 
 
-
 
NC_011094  SeSA_A3271  Holliday junction resolvase-like protein  27.91 
 
 		 138 aa  48.5  0.00009  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.0744312 
 
 
-
 
NC_011149  SeAg_B3260  Holliday junction resolvase-like protein  27.91 
 
 		 138 aa  48.5  0.00009  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.254908  n/a   
 
 
-
 
NC_011205  SeD_A3440  Holliday junction resolvase-like protein  27.91 
 
 		 138 aa  48.5  0.00009  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.00956364 
 
 
-
 
NC_008228  Patl_1154  Holliday junction resolvase YqgF  24.63 
 
 		 143 aa  48.1  0.0001  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008527  LACR_0138  Holliday junction resolvase-like protein  28.17 
 
 		 143 aa  47.8  0.0001  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  25.19 
 
 		 142 aa  47.8  0.0001  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal  1 
 
 
-
 
NC_012880  Dd703_0543  Holliday junction resolvase-like protein  24.64 
 
 		 139 aa  48.1  0.0001  Dickeya dadantii Ech703  Bacteria  normal  0.0491649  n/a   
 
 
-
 
NC_008700  Sama_2473  Holliday junction resolvase-like protein  26.47 
 
 		 139 aa  47  0.0003  Shewanella amazonensis SB2B  Bacteria  normal  0.641283  normal  1 
 
 
-
 
NC_009727  CBUD_2194  Holliday junction resolvase-like protein  24.29 
 
 		 141 aa  46.6  0.0003  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.401443  n/a   
 
 
-
 
NC_010001  Cphy_2297  Holliday junction resolvase YqgF  25.93 
 
 		 150 aa  46.6  0.0003  Clostridium phytofermentans ISDg  Bacteria  normal  0.470334  n/a   
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  27.66 
 
 		 139 aa  46.6  0.0003  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2220  Holliday junction resolvase-like protein  24.29 
 
 		 141 aa  46.2  0.0004  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.0000000031992  n/a   
 
 
-
 
NC_011769  DvMF_2352  Holliday junction resolvase YqgF  24.09 
 
 		 142 aa  46.2  0.0004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.209159 
 
 
-
 
NC_004578  PSPTO_5038  hypothetical protein  27.21 
 
 		 146 aa  45.8  0.0005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  26.36 
 
 		 222 aa  45.8  0.0005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_008699  Noca_2408  Holliday junction resolvase-like protein  27.7 
 
 		 156 aa  45.8  0.0006  Nocardioides sp. JS614  Bacteria  normal  0.332292  n/a   
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  30.43 
 
 		 137 aa  45.4  0.0007  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  30.43 
 
 		 137 aa  45.4  0.0007  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  30.43 
 
 		 137 aa  45.4  0.0007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  30.43 
 
 		 137 aa  45.4  0.0007  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  30.43 
 
 		 137 aa  45.4  0.0007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  30.43 
 
 		 137 aa  45.4  0.0007  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_007005  Psyr_0484  Holliday junction resolvase-like protein  27.21 
 
 		 146 aa  45.4  0.0008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_1378  Holliday junction resolvase-like protein  23.36 
 
 		 156 aa  45.4  0.0008  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013169  Ksed_12520  conserved hypothetical protein TIGR00250  26.52 
 
 		 161 aa  45.1  0.0008  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.101388  normal  0.418633 
 
 
-
 
NC_007404  Tbd_2580  Holliday junction resolvase-like protein  24.81 
 
 		 145 aa  45.1  0.001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.0863234 
 
 
-
 
NC_009436  Ent638_3353  Holliday junction resolvase-like protein  26.36 
 
 		 138 aa  44.7  0.001  Enterobacter sp. 638  Bacteria  normal  0.2584  decreased coverage  0.0020385 
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  29.85 
 
 		 137 aa  44.3  0.001  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_013595  Sros_6093  endonuclease involved in recombination-like protein  25.55 
 
 		 163 aa  45.1  0.001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0746227  normal  1 
 
 
-
 
NC_013421  Pecwa_3911  Holliday junction resolvase-like protein  24.09 
 
 		 139 aa  44.7  0.001  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0877728  n/a   
 
 
-
 
NC_014150  Bmur_2800  Holliday junction resolvase YqgF  26.92 
 
 		 141 aa  43.9  0.002  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  25 
 
 		 140 aa  43.5  0.002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  22.46 
 
 		 138 aa  43.9  0.002  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010816  BLD_0615  putative endonuclease for recombination  22.54 
 
 		 152 aa  43.5  0.003  Bifidobacterium longum DJO10A  Bacteria  normal  0.105236  n/a   
 
 
-
 
NC_011670  PHATRDRAFT_51570  predicted protein  23.7 
 
 		 190 aa  43.1  0.003  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.107223  n/a   
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  26.47 
 
 		 138 aa  43.5  0.003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  27.61 
 
 		 175 aa  42.7  0.004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  27.21 
 
 		 141 aa  42.7  0.004  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal  1 
 
 
-
 
NC_013739  Cwoe_3035  Holliday junction resolvase YqgF  30 
 
 		 133 aa  43.1  0.004  Conexibacter woesei DSM 14684  Bacteria  normal  0.0101605  normal  0.0662243 
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  27.74 
 
 		 137 aa  43.1  0.004  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_013501  Rmar_0873  Holliday junction resolvase YqgF  26 
 
 		 145 aa  43.1  0.004  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_007614  Nmul_A2479  Holliday junction resolvase-like protein  26.4 
 
 		 151 aa  42.4  0.006  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_0834  Holliday junction resolvase-like protein  23.57 
 
 		 140 aa  42.4  0.006  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A3340  Holliday junction resolvase-like protein  23.57 
 
 		 140 aa  42.4  0.006  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010465  YPK_0836  Holliday junction resolvase-like protein  23.57 
 
 		 140 aa  42.4  0.006  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0695104  n/a   
 
 
-
 
NC_011206  Lferr_2668  Holliday junction resolvase YqgF  26.24 
 
 		 143 aa  42.4  0.006  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.933138  normal  1 
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  27.01 
 
 		 137 aa  42.4  0.006  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_011761  AFE_3061  hypothetical protein  26.24 
 
 		 143 aa  42.4  0.006  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  26.62 
 
 		 137 aa  42.4  0.006  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal  1 
 
 
-
 
NC_007760  Adeh_1232  Holliday junction resolvase-like protein  21.97 
 
 		 137 aa  42  0.007  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
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