43 homologs were found in PanDaTox collection
for query gene Fnod_0335 on replicon NC_009718
Organism: Fervidobacterium nodosum Rt17-B1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009718  Fnod_0335  Holliday junction resolvase YqgF  100 
 
 		 226 aa  453  1e-127  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
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NC_009616  Tmel_0300  Holliday junction resolvase YqgF  47.46 
 
 		 202 aa  155  5.0000000000000005e-37  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
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NC_009486  Tpet_1247  Holliday junction resolvase YqgF  33.33 
 
 		 206 aa  84.7  0.000000000000001  Thermotoga petrophila RKU-1  Bacteria  decreased coverage  0.00416078  n/a   
 
 
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NC_010483  TRQ2_1208  Holliday junction resolvase YqgF  33.33 
 
 		 206 aa  80.9  0.00000000000001  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.000404516  n/a   
 
 
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NC_010003  Pmob_0336  Holliday junction resolvase YqgF  27.93 
 
 		 230 aa  68.6  0.00000000007  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
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NC_013739  Cwoe_3035  Holliday junction resolvase YqgF  27.78 
 
 		 133 aa  53.9  0.000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.0101605  normal  0.0662243 
 
 
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NC_014212  Mesil_0224  Holliday junction resolvase YqgF  27.73 
 
 		 135 aa  50.4  0.00002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.776353  normal  0.0108713 
 
 
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NC_002950  PG2202  Holliday junction resolvase-like protein  25.93 
 
 		 138 aa  49.7  0.00003  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_007963  Csal_0059  Holliday junction resolvase-like protein  28 
 
 		 148 aa  48.9  0.00007  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2220  Holliday junction resolvase-like protein  26.77 
 
 		 141 aa  48.1  0.0001  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.0000000031992  n/a   
 
 
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NC_003910  CPS_1251  Holliday junction resolvase-like protein  30.69 
 
 		 148 aa  47  0.0002  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1438  Holliday junction resolvase YqgF  25.24 
 
 		 146 aa  47.4  0.0002  Ammonifex degensii KC4  Bacteria  normal  0.0335959  n/a   
 
 
-
 
NC_009727  CBUD_2194  Holliday junction resolvase-like protein  26.77 
 
 		 141 aa  47  0.0002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.401443  n/a   
 
 
-
 
NC_004578  PSPTO_5038  hypothetical protein  28.03 
 
 		 146 aa  46.2  0.0004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_0484  Holliday junction resolvase-like protein  28.03 
 
 		 146 aa  46.2  0.0004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007969  Pcryo_0061  Holliday junction resolvase YqgF  25.36 
 
 		 173 aa  45.4  0.0007  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  0.498043 
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  23.36 
 
 		 146 aa  44.7  0.001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_009656  PSPA7_0504  Holliday junction resolvase-like protein  29.41 
 
 		 144 aa  43.5  0.002  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_2951  Holliday junction resolvase YqgF  21.85 
 
 		 136 aa  43.9  0.002  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007204  Psyc_0056  hypothetical protein  27.62 
 
 		 177 aa  44.3  0.002  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_05280  Holliday junction resolvase-like protein  29.41 
 
 		 144 aa  43.5  0.002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  28.15 
 
 		 144 aa  43.9  0.002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_010322  PputGB1_5046  Holliday junction resolvase-like protein  27.07 
 
 		 141 aa  42.7  0.004  Pseudomonas putida GB-1  Bacteria  normal  0.433304  normal  1 
 
 
-
 
NC_002947  PP_4996  Holliday junction resolvase-like protein  27.07 
 
 		 141 aa  42.7  0.004  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_03140  Holliday junction resolvase-like protein  27.18 
 
 		 142 aa  42.7  0.004  Azotobacter vinelandii DJ  Bacteria  normal  0.567501  n/a   
 
 
-
 
NC_010084  Bmul_2523  Holliday junction resolvase-like protein  23.53 
 
 		 149 aa  42.7  0.004  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.159244 
 
 
-
 
NC_009512  Pput_4870  Holliday junction resolvase-like protein  27.07 
 
 		 141 aa  42.7  0.004  Pseudomonas putida F1  Bacteria  normal  1  normal  0.0143218 
 
 
-
 
NC_010159  YpAngola_A3340  Holliday junction resolvase-like protein  27.45 
 
 		 140 aa  42.7  0.005  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009708  YpsIP31758_0834  Holliday junction resolvase-like protein  27.45 
 
 		 140 aa  42.7  0.005  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_0836  Holliday junction resolvase-like protein  27.45 
 
 		 140 aa  42.7  0.005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0695104  n/a   
 
 
-
 
NC_010501  PputW619_0468  Holliday junction resolvase-like protein  27.07 
 
 		 141 aa  42.4  0.005  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_1378  Holliday junction resolvase-like protein  25.44 
 
 		 156 aa  42.7  0.005  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007510  Bcep18194_A3963  Holliday junction resolvase-like protein  22.69 
 
 		 149 aa  42.4  0.006  Burkholderia sp. 383  Bacteria  normal  1  normal  0.539384 
 
 
-
 
NC_008542  Bcen2424_0865  Holliday junction resolvase-like protein  23.53 
 
 		 149 aa  42.4  0.006  Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_010508  Bcenmc03_0836  Holliday junction resolvase-like protein  23.53 
 
 		 149 aa  42.4  0.006  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.311364  hitchhiker  0.00221177 
 
 
-
 
NC_008060  Bcen_0383  Holliday junction resolvase-like protein  23.53 
 
 		 149 aa  42.4  0.006  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_011126  HY04AAS1_0205  Holliday junction resolvase YqgF  31.15 
 
 		 123 aa  42  0.007  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_1131  Holliday junction resolvase-like protein  30.39 
 
 		 141 aa  42  0.007  Shewanella pealeana ATCC 700345  Bacteria  normal  0.111461  n/a   
 
 
-
 
NC_009524  PsycPRwf_0143  Holliday junction resolvase YqgF  23.65 
 
 		 177 aa  42  0.007  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_1579  Holliday junction resolvase-like protein  26 
 
 		 152 aa  42  0.008  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.657054 
 
 
-
 
NC_014150  Bmur_2800  Holliday junction resolvase YqgF  28.68 
 
 		 141 aa  42  0.008  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_011992  Dtpsy_2895  Holliday junction resolvase-like protein  27.08 
 
 		 139 aa  41.6  0.01  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_3572  Holliday junction resolvase-like protein  27.08 
 
 		 139 aa  41.6  0.01  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.417353 
 
 
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