More than 300 homologs were found in PanDaTox collection
for query gene Noca_3491 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008699  Noca_3491  transcriptional regulator domain-containing protein  100 
 
 		 142 aa  285  1e-76  Nocardioides sp. JS614  Bacteria  normal  0.271981  n/a   
 
 
-
 
NC_013510  Tcur_4122  two component transcriptional regulator, winged helix family  56.7 
 
 		 223 aa  118  3e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1333  response regulator receiver protein  57.29 
 
 		 222 aa  117  7e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.40527  normal  0.1595 
 
 
-
 
NC_007333  Tfu_2549  response regulator receiver  54.46 
 
 		 222 aa  115  1.9999999999999998e-25  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0707  winged helix family two component transcriptional regulator  57.45 
 
 		 222 aa  115  1.9999999999999998e-25  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_21090  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  51.43 
 
 		 231 aa  113  1.0000000000000001e-24  Brachybacterium faecium DSM 4810  Bacteria  normal  0.664911  n/a   
 
 
-
 
NC_014210  Ndas_3846  two component transcriptional regulator, winged helix family  55.32 
 
 		 222 aa  111  3e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0835  two component transcriptional regulator, winged helix family  54.26 
 
 		 222 aa  110  6e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  hitchhiker  0.0000000540746 
 
 
-
 
NC_013530  Xcel_2599  two component transcriptional regulator, winged helix family  49.48 
 
 		 227 aa  104  3e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_08510  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  49.48 
 
 		 227 aa  104  4e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103906  normal  0.575645 
 
 
-
 
NC_014151  Cfla_2389  two component transcriptional regulator, winged helix family  49.48 
 
 		 240 aa  103  7e-22  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0687652  decreased coverage  0.0000973314 
 
 
-
 
NC_012669  Bcav_1155  two component transcriptional regulator, winged helix family  47.47 
 
 		 230 aa  103  1e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.560017  normal  1 
 
 
-
 
NC_013441  Gbro_1844  response regulator receiver  52.04 
 
 		 224 aa  100  5e-21  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0160507  n/a   
 
 
-
 
NC_013174  Jden_1871  two component transcriptional regulator, winged helix family  48.45 
 
 		 226 aa  100  6e-21  Jonesia denitrificans DSM 20603  Bacteria  normal  0.105791  normal  0.266081 
 
 
-
 
NC_014158  Tpau_1046  two component transcriptional regulator, winged helix family  45.63 
 
 		 230 aa  98.2  3e-20  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0213528  n/a   
 
 
-
 
NC_013093  Amir_6380  two component transcriptional regulator, winged helix family  46.46 
 
 		 223 aa  96.7  1e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  0.654273  n/a   
 
 
-
 
NC_009523  RoseRS_0188  two component transcriptional regulator  47.96 
 
 		 245 aa  89.4  1e-17  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00347389  normal  0.0545477 
 
 
-
 
NC_009767  Rcas_4351  two component transcriptional regulator  45.92 
 
 		 245 aa  89  2e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.110039  normal  1 
 
 
-
 
NC_013169  Ksed_08380  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  45.65 
 
 		 244 aa  89  2e-17  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0276649  normal  0.165598 
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  45.92 
 
 		 236 aa  88.2  4e-17  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  unclonable  0.0000000182155 
 
 
-
 
NC_013235  Namu_4223  two component transcriptional regulator, winged helix family  42.57 
 
 		 226 aa  87.4  6e-17  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.000102305  normal  0.0938221 
 
 
-
 
NC_008699  Noca_4422  response regulator receiver  43.16 
 
 		 237 aa  86.3  1e-16  Nocardioides sp. JS614  Bacteria  normal  0.259959  n/a   
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  45.54 
 
 		 230 aa  86.7  1e-16  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_013595  Sros_2243  response regulator receiver protein  43.16 
 
 		 226 aa  84.3  5e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0170584  normal  0.321433 
 
 
-
 
NC_010814  Glov_0998  two component transcriptional regulator, winged helix family  42.16 
 
 		 223 aa  84.3  5e-16  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_4873  two component transcriptional regulator, winged helix family  38.54 
 
 		 228 aa  82.4  0.000000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0727597  normal  0.414949 
 
 
-
 
NC_013501  Rmar_0819  two component transcriptional regulator, winged helix family  35.92 
 
 		 246 aa  81.3  0.000000000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1606  two component transcriptional regulator  43.01 
 
 		 230 aa  80.9  0.000000000000005  Acidothermus cellulolyticus 11B  Bacteria  normal  0.307098  normal  0.688459 
 
 
-
 
NC_009767  Rcas_0997  two component transcriptional regulator  41.58 
 
 		 230 aa  80.9  0.000000000000006  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.679101  normal  1 
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  41.76 
 
 		 232 aa  79.3  0.00000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_009972  Haur_0804  two component transcriptional regulator  39.39 
 
 		 236 aa  79  0.00000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.324741  n/a   
 
 
-
 
NC_009380  Strop_1781  response regulator receiver  42.55 
 
 		 226 aa  77.8  0.00000000000004  Salinispora tropica CNB-440  Bacteria  normal  0.365073  normal  1 
 
 
-
 
NC_008699  Noca_3826  response regulator receiver  36.36 
 
 		 228 aa  77.4  0.00000000000005  Nocardioides sp. JS614  Bacteria  normal  0.0204609  n/a   
 
 
-
 
NC_007413  Ava_3369  two component transcriptional regulator  40.38 
 
 		 250 aa  77.4  0.00000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  0.881494  normal  0.845013 
 
 
-
 
NC_014248  Aazo_2741  winged helix family two component transcriptional regulator  41.67 
 
 		 250 aa  76.6  0.0000000000001  'Nostoc azollae' 0708  Bacteria  normal  0.0957275  n/a   
 
 
-
 
NC_009953  Sare_2914  two component transcriptional regulator  40.82 
 
 		 238 aa  75.5  0.0000000000002  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_0919  two component transcriptional regulator, winged helix family  41 
 
 		 227 aa  75.1  0.0000000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.767242 
 
 
-
 
NC_008255  CHU_3042  two-component response regulator  36.08 
 
 		 228 aa  75.1  0.0000000000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.330896  normal  1 
 
 
-
 
NC_009654  Mmwyl1_0419  two component transcriptional regulator  37.5 
 
 		 229 aa  75.1  0.0000000000003  Marinomonas sp. MWYL1  Bacteria  normal  0.509677  normal  1 
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  38.04 
 
 		 239 aa  75.1  0.0000000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_009953  Sare_4856  two component transcriptional regulator  44.44 
 
 		 229 aa  75.1  0.0000000000003  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0324014 
 
 
-
 
NC_013595  Sros_2839  response regulator receiver protein  34.74 
 
 		 228 aa  75.1  0.0000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0400316  normal  0.0390199 
 
 
-
 
NC_009380  Strop_2454  response regulator receiver  43.21 
 
 		 334 aa  74.7  0.0000000000004  Salinispora tropica CNB-440  Bacteria  normal  0.811467  normal  0.554659 
 
 
-
 
NC_008148  Rxyl_0187  two component transcriptional regulator  41.3 
 
 		 227 aa  74.7  0.0000000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_1768  two component transcriptional regulator  39.18 
 
 		 229 aa  74.7  0.0000000000004  Salinispora arenicola CNS-205  Bacteria  normal  0.0372211  hitchhiker  0.00235645 
 
 
-
 
NC_011891  A2cp1_3106  two component transcriptional regulator, winged helix family  39 
 
 		 234 aa  74.3  0.0000000000005  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_3000  two component transcriptional regulator, winged helix family  39 
 
 		 234 aa  74.3  0.0000000000005  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6985  two component transcriptional regulator  37.14 
 
 		 229 aa  74.3  0.0000000000005  Frankia sp. EAN1pec  Bacteria  normal  0.0162975  normal  1 
 
 
-
 
NC_009380  Strop_1594  response regulator receiver  38.61 
 
 		 219 aa  73.9  0.0000000000006  Salinispora tropica CNB-440  Bacteria  normal  0.349405  normal  1 
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  36.46 
 
 		 234 aa  73.9  0.0000000000007  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  36.46 
 
 		 234 aa  73.9  0.0000000000007  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_009380  Strop_1695  response regulator receiver  41 
 
 		 218 aa  73.9  0.0000000000008  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.747822 
 
 
-
 
NC_011138  MADE_03339  Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain  41.67 
 
 		 226 aa  73.6  0.0000000000008  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_4293  two component transcriptional regulator  38.83 
 
 		 224 aa  73.6  0.0000000000008  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000934276  n/a   
 
 
-
 
NC_013165  Shel_18040  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.05 
 
 		 232 aa  73.6  0.0000000000009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU0451  DNA-binding response regulator  37.86 
 
 		 224 aa  73.2  0.000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.313098  n/a   
 
 
-
 
NC_013170  Ccur_02230  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  38.78 
 
 		 229 aa  72.8  0.000000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5447  response regulator receiver protein  43.06 
 
 		 228 aa  73.2  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00883739  normal  0.15212 
 
 
-
 
NC_007516  Syncc9605_2384  two component transcriptional regulator  38.38 
 
 		 259 aa  72.8  0.000000000001  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_3363  two component transcriptional regulator, winged helix family  48.61 
 
 		 233 aa  73.6  0.000000000001  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00866984  n/a   
 
 
-
 
NC_013947  Snas_4021  two component transcriptional regulator, winged helix family  39.76 
 
 		 235 aa  73.6  0.000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002976  SERP1256  alkaline phosphatase synthesis transcriptional regulatory protein PhoP  36.26 
 
 		 236 aa  72.8  0.000000000002  Staphylococcus epidermidis RP62A  Bacteria  normal  0.577358  n/a   
 
 
-
 
NC_002977  MCA2330  DNA-binding response regulator  38.32 
 
 		 228 aa  72  0.000000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_2141  two component transcriptional regulator, winged helix family  43.43 
 
 		 241 aa  72.4  0.000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.316028  n/a   
 
 
-
 
NC_013512  Sdel_2131  response regulator receiver  35.44 
 
 		 223 aa  72  0.000000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_1478  two component transcriptional regulator  39.58 
 
 		 240 aa  72  0.000000000002  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000111909  normal  1 
 
 
-
 
NC_008009  Acid345_4460  two component transcriptional regulator  41.05 
 
 		 230 aa  72.4  0.000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.94443  normal  1 
 
 
-
 
NC_008148  Rxyl_0589  two component transcriptional regulator  37.89 
 
 		 229 aa  72.4  0.000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.588929  n/a   
 
 
-
 
NC_009953  Sare_1693  two component transcriptional regulator  45 
 
 		 229 aa  72.4  0.000000000002  Salinispora arenicola CNS-205  Bacteria  normal  1  decreased coverage  0.000234642 
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  32.63 
 
 		 232 aa  72.4  0.000000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A0253  DNA-binding response regulator PhoB  36 
 
 		 229 aa  72.4  0.000000000002  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_05980  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  36.36 
 
 		 230 aa  72.4  0.000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.553702 
 
 
-
 
NC_013204  Elen_2866  two component transcriptional regulator, winged helix family  36.73 
 
 		 231 aa  71.6  0.000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_0880  two component transcriptional regulator  39 
 
 		 234 aa  72  0.000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.220279 
 
 
-
 
NC_014158  Tpau_3286  two component transcriptional regulator, winged helix family  39.39 
 
 		 228 aa  71.6  0.000000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.167791  n/a   
 
 
-
 
NC_008146  Mmcs_4301  two component transcriptional regulator  43.18 
 
 		 230 aa  72  0.000000000003  Mycobacterium sp. MCS  Bacteria  normal  0.681825  n/a   
 
 
-
 
NC_008578  Acel_1595  two component transcriptional regulator  39.13 
 
 		 227 aa  72  0.000000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  0.526383  normal  0.570373 
 
 
-
 
NC_009077  Mjls_4681  two component transcriptional regulator  43.18 
 
 		 230 aa  72  0.000000000003  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.354926 
 
 
-
 
NC_008705  Mkms_4387  two component transcriptional regulator  43.18 
 
 		 230 aa  72  0.000000000003  Mycobacterium sp. KMS  Bacteria  normal  0.0316317  normal  1 
 
 
-
 
NC_014211  Ndas_5196  two component transcriptional regulator, winged helix family  41.3 
 
 		 232 aa  71.2  0.000000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.28208  normal  1 
 
 
-
 
NC_007517  Gmet_3383  two component transcriptional regulator  36.89 
 
 		 224 aa  71.2  0.000000000004  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  31.87 
 
 		 238 aa  71.2  0.000000000004  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3904  two component transcriptional regulator, winged helix family  40.43 
 
 		 230 aa  71.2  0.000000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.144495  normal  1 
 
 
-
 
NC_013093  Amir_5007  two component transcriptional regulator, winged helix family  44 
 
 		 238 aa  70.9  0.000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007204  Psyc_1596  two component heavy metal response transcriptional regulator  36.54 
 
 		 238 aa  70.9  0.000000000005  Psychrobacter arcticus 273-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_3081  two component signal transduction response regulator  39.58 
 
 		 223 aa  70.9  0.000000000005  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_0867  transcriptional regulator PhoB  36.73 
 
 		 229 aa  70.9  0.000000000005  Enterobacter sp. 638  Bacteria  normal  0.437737  normal  1 
 
 
-
 
NC_008820  P9303_26531  two-component response regulator  37.37 
 
 		 248 aa  70.9  0.000000000005  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  1 
 
 
-
 
NC_007333  Tfu_0343  response regulator receiver  37.17 
 
 		 232 aa  70.9  0.000000000006  Thermobifida fusca YX  Bacteria  normal  0.86362  n/a   
 
 
-
 
NC_007333  Tfu_1238  response regulator receiver  40.2 
 
 		 218 aa  70.9  0.000000000006  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_007513  Syncc9902_0308  two component transcriptional regulator  37.37 
 
 		 248 aa  70.9  0.000000000006  Synechococcus sp. CC9902  Bacteria  normal  0.030574  n/a   
 
 
-
 
NC_007760  Adeh_2914  two component transcriptional regulator  37 
 
 		 245 aa  70.9  0.000000000006  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.634998  n/a   
 
 
-
 
NC_014248  Aazo_0581  winged helix family two component transcriptional regulator  37 
 
 		 242 aa  70.9  0.000000000006  'Nostoc azollae' 0708  Bacteria  normal  0.296955  n/a   
 
 
-
 
NC_011369  Rleg2_0925  two component transcriptional regulator, winged helix family  41.41 
 
 		 248 aa  70.9  0.000000000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0932454  normal  0.0109566 
 
 
-
 
NC_009783  VIBHAR_01026  response regulator  35 
 
 		 229 aa  70.9  0.000000000006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009953  Sare_1554  two component transcriptional regulator  37.62 
 
 		 218 aa  70.9  0.000000000006  Salinispora arenicola CNS-205  Bacteria  normal  0.083917  hitchhiker  0.00805861 
 
 
-
 
NC_009077  Mjls_4523  two component transcriptional regulator  41.11 
 
 		 251 aa  70.9  0.000000000006  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_2886  response regulator receiver  39.8 
 
 		 233 aa  70.5  0.000000000007  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.423276 
 
 
-
 
NC_009976  P9211_01481  two-component response regulator  37.37 
 
 		 248 aa  70.5  0.000000000007  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008554  Sfum_2007  two component transcriptional regulator  39.8 
 
 		 223 aa  70.5  0.000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
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