| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2141 |
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| Symbol | |
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| ID | 6409801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2311711 |
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| End bp | 2312436 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642712025 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001991137 |
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| Protein GI | 192290532 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.316028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGCATC AGAGCCCGCA GAGTTTGAAG AAATCCGACA GCAATATGCG TCTGTTGATC
ATTGAGGACG ACCGCGAATC CGCCGACTAT CTGGTCAAGG CGTTTCGCGA GGTCGGCCAC
ATCGCCGATC TCGCCAGCGA TGGCGAAGAG GGCCTCGCGA TGGCGGAGAG CGGCGACTAC
GACGTGCTGG TGGTCGATCG CATGCTGCCG AAGCGCGACG GCCTGTCGGT GATCGGAAGC
CTGCGCGACA AGGGCAACCG AACGCCGGTG CTGATCCTGT CCGCGCTCGG CCAGGTCGAC
GACCGTATCA AGGGCCTGCG TGCCGGTGGC GACGACTATC TGCCGAAGCC CTACGCCTTC
GCGGAACTGC TGGCGCGCGT CGAGGTGCTG TCGCGCCGTC ACGGCGGCCC GGCGGAAGAA
ACCAGCTACC GCGTCGCCGA TCTCGAACTC GACCGGCTGT CGCATCGCGT CACCCGCGGC
GGCGAGGAGC TGACGCTGCA GCCGCGCGAA TTCAGGCTGC TCGAATATCT GATGAAGCAC
GCCGGGCAGG TGGTGACCCG CACCATGCTG CTGGAGAACG TCTGGGATTA TCACTTCGAT
CCGCAGACCA ACGTCATCGA CGTGCACATC TCCCGGCTTC GCTCGAAGAT CGACAAGGGC
TTCGATCACC CGCTGCTGCA CACCATCCGC GGCGCCGGCT ACATGATCCG CGACGGGCTG
CGCTGA
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| Protein sequence | MLHQSPQSLK KSDSNMRLLI IEDDRESADY LVKAFREVGH IADLASDGEE GLAMAESGDY
DVLVVDRMLP KRDGLSVIGS LRDKGNRTPV LILSALGQVD DRIKGLRAGG DDYLPKPYAF
AELLARVEVL SRRHGGPAEE TSYRVADLEL DRLSHRVTRG GEELTLQPRE FRLLEYLMKH
AGQVVTRTML LENVWDYHFD PQTNVIDVHI SRLRSKIDKG FDHPLLHTIR GAGYMIRDGL
R
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