| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2007 |
|---|
| Symbol | |
|---|
| ID | 4459673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2457532 |
|---|
| End bp | 2458203 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639702773 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_846125 |
|---|
| Protein GI | 116749438 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTCC TGGTGGTGGA AGACGAGAAG AAAGTCGCGA GCTTTATCCG TAAAGGGCTG
GAAGAAGAGG GTTATGCGGT GGACGTGGCC CTGGACGGCG AGGTTGGCCT CCAGATGGCC
ATGGACCGGG TGCACGATCT GATCATCCTG GACATCCAGC TTCCGCGCCT GAGCGGAATG
GAACTGCTCC GGTCGCTGCG CGCAAAACGG ATTTCGACGC CTGTCCTGCT GCTCACCGTG
AGGGCGACCA TCGAAGACAA GGTCCTCGGT CTGGATGCTG GCGCCGACGA CTACCTGACC
AAGCCCTTCT CTTTCCGCGA ACTGGTCGCG CGGGTGCGCG CCCTGTTGAG GCGCCGGGCG
GAAAGCAGTC AGACCGAGCT CCGGGTAGCC GACCTGACGC TCGATCCGGT CAGGCACACA
GTGTCGAGAG GTTCGGAAAA GATCGAGCTC ACGGCCAAGG AGTTCGCGCT TCTCGACTAT
TTCATGCGCA ATCCGGACCG GGTCCTGACC AGGACCATGA TTGCCGAACA CGTCTGGGAT
TATGATTTCG ACTCGATGAC GAATGTCATC GACGTTTACG TGAATTATCT TCGCCGCAAG
ATCGATTCCG ACCGCGAACC GAAGCTCATC CATACCGTTC GCGGGGTCGG CTACATGCTG
AAGACGGAGT GA
|
|---|
| Protein sequence | MRLLVVEDEK KVASFIRKGL EEEGYAVDVA LDGEVGLQMA MDRVHDLIIL DIQLPRLSGM
ELLRSLRAKR ISTPVLLLTV RATIEDKVLG LDAGADDYLT KPFSFRELVA RVRALLRRRA
ESSQTELRVA DLTLDPVRHT VSRGSEKIEL TAKEFALLDY FMRNPDRVLT RTMIAEHVWD
YDFDSMTNVI DVYVNYLRRK IDSDREPKLI HTVRGVGYML KTE
|
|---|
| |