Gene Strop_1695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1695 
Symbol 
ID5058154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1938993 
End bp1939649 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content72% 
IMG OID640473967 
Productresponse regulator receiver 
Protein accessionYP_001158537 
Protein GI145594240 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.747822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGATCC TGCTTGTCGA GGACGACCAC CGGGTGGCCG CCGCGCTGAC TGCGGCCCTG 
ACCCGGCGTG GTTACGAGGT GGAGCACGCG GCGACGGTCG CCGCCGCGCT CTGCGCCGCC
CCGTGCGACC TGGCCCTGCT GGATCTCACC CTGCCCGACG GGGACGGCAC CGACCTGTGT
CGGGAACTGC GGCGGCGCAG CAGCCAGCTC GGGATCATTG CGGTGACCGC GCGGGGGGAG
GAGCGCGACC GGGTGCTGGG TCTGCGGATC GGTGCGGACG ACTACGTGGT CAAGCCGTTC
TCGATGGTGG AGTTGCAGGC CCGGATCGAG GCGGTGCTGC GCCGCGCCGC GCAGGCCGCC
CCCGAGCGCA ACCTGATCGA GGTCGGTCCG GTCCAGATCG ATGTGGCGGC CCGTACGGTC
CGCGTCCACG CCCAGGAGGT GGCGCTGACC CGCAAGGAGT TCGACGTGTT TCTCTCCCTG
GCCCGCCAGC CCGGGATTGC CGTGCCCCGC GATCGGATCC TGCTCGACGC CTGGGGCACC
ACCTTCGCCG ACCGGCACAC CGTCGAGGTG CACGTCGGCT CGCTTCGCGG CAAGCTGGGC
GACCCTCGCC TGGTGGAGAC CGTACGCGGC GTCGGCTACC GGCTGCGGAA CGAGTGA
 
Protein sequence
MRILLVEDDH RVAAALTAAL TRRGYEVEHA ATVAAALCAA PCDLALLDLT LPDGDGTDLC 
RELRRRSSQL GIIAVTARGE ERDRVLGLRI GADDYVVKPF SMVELQARIE AVLRRAAQAA
PERNLIEVGP VQIDVAARTV RVHAQEVALT RKEFDVFLSL ARQPGIAVPR DRILLDAWGT
TFADRHTVEV HVGSLRGKLG DPRLVETVRG VGYRLRNE