Gene Tpau_1046 details

Gene Information

• Locus tag: Tpau_1046
• ID: 9155186
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1072486
• End bp: 1073178
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 71%
• Product: two component transcriptional regulator, winged helix family
• Protein accession: YP_003646018
• Protein GI: 296138775

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0213528
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACAC GGGTTCTGCT GGCCGAGGAC GACGAGGCGA TCGCATCGCC GCTCGCGCGC 
GCTCTCACTC GCGAGGGATA CGACGTCACG GTGGCCGCCA CCGGCACCGA TGCGGTGCGC 
CGCGCGCTGG ACGAGGAGTT CGCGCTGCTC ATCCTCGACC TGGGGCTGCC CGAGCTCGAC 
GGGTTGGAGG TGTGCCGCGA AGTGCGGGCC GCACGGCCCG AGGTGGCGGT GCTCATGCTC 
ACCGCGCGCA CCGACGAGAT GGACTTCGTG GTCGGCCTCG ACGCCGGCGC GGACGACTAC 
GTGGGCAAGC CCTTCCGGAT GTTCGAGTTG ATGGCCCGTA CCCGGGCGCT GCTGCGGCGC 
AGCGCGCCCG CCCCGGACAC CGGCGATGTG CTCGACGCGG GCGGAATCCG GCTCGACGCC 
AAGGCGCGAC GGGTCACGGT GGACGGGTCC GATGTGGCCC TGGCCAACAA GGAGTTCGAG 
CTGCTGCGCT TCCTCATGGA GCGTGCGGGC CAACTGCTCT CCCGCGAGGA CATCCTCGCG 
GACGTGTGGG GCGACTCCGA TCTGCGGGGA TCGAAGACCC TCGATATGCA CATCTCCTGG 
TTGCGCCGGA AGATCGGCGA CGACACCGGG CCGCACGGCC CGCGGCGCAT CGTCACCGTT 
CGCGGTGTCG GCTTCCGCTT CGACGCGGAG TAG 

 

Protein sequence

MTTRVLLAED DEAIASPLAR ALTREGYDVT VAATGTDAVR RALDEEFALL ILDLGLPELD 
GLEVCREVRA ARPEVAVLML TARTDEMDFV VGLDAGADDY VGKPFRMFEL MARTRALLRR 
SAPAPDTGDV LDAGGIRLDA KARRVTVDGS DVALANKEFE LLRFLMERAG QLLSREDILA 
DVWGDSDLRG SKTLDMHISW LRRKIGDDTG PHGPRRIVTV RGVGFRFDAE