More than 300 homologs were found in PanDaTox collection
for query gene Amir_6380 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_6380  two component transcriptional regulator, winged helix family  100 
 
 
223 aa  439  9.999999999999999e-123  Actinosynnema mirum DSM 43827  Bacteria  normal  0.654273  n/a   
 
 
-
 
NC_013159  Svir_05980  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  79.04 
 
 
230 aa  306  2.0000000000000002e-82  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.553702 
 
 
-
 
NC_014165  Tbis_0707  winged helix family two component transcriptional regulator  67.27 
 
 
222 aa  283  2.0000000000000002e-75  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4223  two component transcriptional regulator, winged helix family  68.89 
 
 
226 aa  283  2.0000000000000002e-75  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.000102305  normal  0.0938221 
 
 
-
 
NC_013595  Sros_1333  response regulator receiver protein  66.82 
 
 
222 aa  282  3.0000000000000004e-75  Streptosporangium roseum DSM 43021  Bacteria  normal  0.40527  normal  0.1595 
 
 
-
 
NC_013510  Tcur_4122  two component transcriptional regulator, winged helix family  65.47 
 
 
223 aa  281  6.000000000000001e-75  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0835  two component transcriptional regulator, winged helix family  65.61 
 
 
222 aa  276  2e-73  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.0000000540746 
 
 
-
 
NC_014158  Tpau_1046  two component transcriptional regulator, winged helix family  64.29 
 
 
230 aa  269  2e-71  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0213528  n/a   
 
 
-
 
NC_007333  Tfu_2549  response regulator receiver  63.64 
 
 
222 aa  268  4e-71  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3846  two component transcriptional regulator, winged helix family  63.93 
 
 
222 aa  266  2e-70  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1871  two component transcriptional regulator, winged helix family  61.23 
 
 
226 aa  258  4e-68  Jonesia denitrificans DSM 20603  Bacteria  normal  0.105791  normal  0.266081 
 
 
-
 
NC_013172  Bfae_21090  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  60.79 
 
 
231 aa  257  1e-67  Brachybacterium faecium DSM 4810  Bacteria  normal  0.664911  n/a   
 
 
-
 
NC_012669  Bcav_1155  two component transcriptional regulator, winged helix family  61.78 
 
 
230 aa  253  1.0000000000000001e-66  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.560017  normal 
 
 
-
 
NC_013521  Sked_08510  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  61.95 
 
 
227 aa  254  1.0000000000000001e-66  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103906  normal  0.575645 
 
 
-
 
NC_014151  Cfla_2389  two component transcriptional regulator, winged helix family  60.62 
 
 
240 aa  253  2.0000000000000002e-66  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0687652  decreased coverage  0.0000973314 
 
 
-
 
NC_013530  Xcel_2599  two component transcriptional regulator, winged helix family  60.27 
 
 
227 aa  250  1e-65  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1844  response regulator receiver  64.57 
 
 
224 aa  246  2e-64  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0160507  n/a   
 
 
-
 
NC_013169  Ksed_08380  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  60.44 
 
 
244 aa  231  7.000000000000001e-60  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0276649  normal  0.165598 
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  50.44 
 
 
226 aa  205  5e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  49.78 
 
 
228 aa  201  8e-51  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  48.43 
 
 
228 aa  195  4.0000000000000005e-49  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  47.6 
 
 
229 aa  195  6e-49  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  48.23 
 
 
230 aa  194  8.000000000000001e-49  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  47.35 
 
 
226 aa  194  1e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  47.14 
 
 
236 aa  194  1e-48  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000182155 
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  45.58 
 
 
226 aa  193  2e-48  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  48.23 
 
 
231 aa  191  6e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0724  two component transcriptional regulator  46.02 
 
 
226 aa  189  2.9999999999999997e-47  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0343  response regulator receiver  49.78 
 
 
232 aa  188  5.999999999999999e-47  Thermobifida fusca YX  Bacteria  normal  0.86362  n/a   
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  44.49 
 
 
226 aa  188  5.999999999999999e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  46.72 
 
 
229 aa  187  8e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0850  two component transcriptional regulator, winged helix family  45.58 
 
 
226 aa  187  1e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  44.89 
 
 
225 aa  185  5e-46  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  43.36 
 
 
226 aa  185  6e-46  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  46.05 
 
 
226 aa  184  7e-46  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  45.81 
 
 
228 aa  184  9e-46  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_31270  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  45.13 
 
 
221 aa  184  1.0000000000000001e-45  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.014564  normal  0.249814 
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  44.98 
 
 
230 aa  184  1.0000000000000001e-45  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_009767  Rcas_0997  two component transcriptional regulator  44.54 
 
 
230 aa  182  2.0000000000000003e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.679101  normal 
 
 
-
 
NC_009972  Haur_0804  two component transcriptional regulator  46.26 
 
 
236 aa  183  2.0000000000000003e-45  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.324741  n/a   
 
 
-
 
NC_009972  Haur_2799  two component transcriptional regulator  47.03 
 
 
236 aa  183  2.0000000000000003e-45  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000368356  n/a   
 
 
-
 
NC_008146  Mmcs_0661  two component transcriptional regulator  43.86 
 
 
228 aa  182  3e-45  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0674  two component transcriptional regulator  43.86 
 
 
228 aa  182  3e-45  Mycobacterium sp. KMS  Bacteria  normal  normal  0.850641 
 
 
-
 
NC_008726  Mvan_0831  two component transcriptional regulator  43.42 
 
 
228 aa  182  3e-45  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.310785  normal 
 
 
-
 
NC_009077  Mjls_0654  two component transcriptional regulator  43.86 
 
 
228 aa  182  3e-45  Mycobacterium sp. JLS  Bacteria  normal  normal  0.682961 
 
 
-
 
NC_013235  Namu_4929  two component transcriptional regulator, winged helix family  44.49 
 
 
226 aa  181  7e-45  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1240  response regulator receiver  48.2 
 
 
234 aa  181  7e-45  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0082  two component transcriptional regulator  43.42 
 
 
228 aa  181  7e-45  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  44.69 
 
 
226 aa  181  8.000000000000001e-45  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3859  two component transcriptional regulator  48.4 
 
 
235 aa  181  1e-44  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_007777  Francci3_0471  two component transcriptional regulator  47.35 
 
 
226 aa  180  1e-44  Frankia sp. CcI3  Bacteria  normal  normal  0.734397 
 
 
-
 
NC_013595  Sros_1549  response regulator receiver protein  49.55 
 
 
241 aa  180  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0273908  normal 
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  43.86 
 
 
229 aa  180  2e-44  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10499  two component system sensor transduction protein regX3  43.17 
 
 
227 aa  179  2e-44  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.46064e-66  normal 
 
 
-
 
NC_010816  BLD_1073  putative response regulator  41.81 
 
 
234 aa  179  2.9999999999999997e-44  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2401  two component transcriptional regulator  47.96 
 
 
283 aa  179  2.9999999999999997e-44  Frankia sp. CcI3  Bacteria  normal  0.0476592  normal  0.0197415 
 
 
-
 
NC_013595  Sros_6397  response regulator receiver protein  46.72 
 
 
237 aa  179  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.680662  normal  0.0804167 
 
 
-
 
NC_013947  Snas_3904  two component transcriptional regulator, winged helix family  48.18 
 
 
230 aa  179  2.9999999999999997e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.144495  normal 
 
 
-
 
NC_008148  Rxyl_0378  two component transcriptional regulator  43.72 
 
 
234 aa  179  2.9999999999999997e-44  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  42.49 
 
 
239 aa  178  7e-44  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  48.03 
 
 
233 aa  177  8e-44  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_013947  Snas_0580  two component transcriptional regulator, winged helix family  43.61 
 
 
226 aa  177  8e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0654  two component transcriptional regulator, winged helix family  43.67 
 
 
229 aa  177  1e-43  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.200991  n/a   
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  39.91 
 
 
232 aa  176  2e-43  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  37.44 
 
 
236 aa  176  2e-43  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_009664  Krad_0896  two component transcriptional regulator, winged helix family  48.23 
 
 
226 aa  176  3e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.232326  hitchhiker  0.00518822 
 
 
-
 
NC_013170  Ccur_02230  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  43.05 
 
 
229 aa  176  3e-43  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2867  two component transcriptional regulator, winged helix family  43.59 
 
 
233 aa  176  3e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  42.92 
 
 
226 aa  176  3e-43  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0337  two component transcriptional regulator  47.14 
 
 
227 aa  176  4e-43  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009091  P9301_12431  two-component response regulator, phosphate  40.43 
 
 
242 aa  175  5e-43  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.15803  n/a   
 
 
-
 
NC_008578  Acel_1595  two component transcriptional regulator  45.66 
 
 
227 aa  175  6e-43  Acidothermus cellulolyticus 11B  Bacteria  normal  0.526383  normal  0.570373 
 
 
-
 
NC_009338  Mflv_3998  two component transcriptional regulator  43.69 
 
 
220 aa  175  6e-43  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.278973  normal  0.137181 
 
 
-
 
NC_013204  Elen_2866  two component transcriptional regulator, winged helix family  43.75 
 
 
231 aa  175  6e-43  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3369  two component transcriptional regulator  44.59 
 
 
250 aa  174  7e-43  Anabaena variabilis ATCC 29413  Bacteria  normal  0.881494  normal  0.845013 
 
 
-
 
NC_013169  Ksed_03700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  44.25 
 
 
226 aa  174  7e-43  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.132847 
 
 
-
 
NC_007577  PMT9312_0717  two component transcriptional regulator  40.87 
 
 
242 aa  174  8e-43  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4793  two component transcriptional regulator, winged helix family  44.39 
 
 
219 aa  174  8e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.732153 
 
 
-
 
NC_013093  Amir_6208  two component transcriptional regulator, winged helix family  49.1 
 
 
226 aa  174  9e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  41.52 
 
 
232 aa  174  9e-43  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0997  response regulator receiver  43.17 
 
 
228 aa  174  9e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2675  DNA-binding response regulator  40.81 
 
 
224 aa  174  9.999999999999999e-43  Bacillus cereus ATCC 10987  Bacteria  normal  0.0180828  n/a   
 
 
-
 
NC_009077  Mjls_4523  two component transcriptional regulator  44.74 
 
 
251 aa  174  9.999999999999999e-43  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1276  two component transcriptional regulator, winged helix family  43.97 
 
 
242 aa  173  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.114994 
 
 
-
 
NC_009523  RoseRS_0188  two component transcriptional regulator  42.73 
 
 
245 aa  173  1.9999999999999998e-42  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00347389  normal  0.0545477 
 
 
-
 
NC_013441  Gbro_2604  response regulator receiver  43.69 
 
 
244 aa  173  1.9999999999999998e-42  Gordonia bronchialis DSM 43247  Bacteria  normal  0.88392  n/a   
 
 
-
 
NC_007516  Syncc9605_1618  two component transcriptional regulator  41.41 
 
 
254 aa  173  1.9999999999999998e-42  Synechococcus sp. CC9605  Bacteria  normal  normal  0.218753 
 
 
-
 
NC_009632  SaurJH1_1505  response regulator receiver  40.37 
 
 
219 aa  173  1.9999999999999998e-42  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.404603  n/a   
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  44.1 
 
 
236 aa  173  1.9999999999999998e-42  Magnetococcus sp. MC-1  Bacteria  normal  decreased coverage  0.00391258 
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  44.44 
 
 
242 aa  173  1.9999999999999998e-42  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_013441  Gbro_4233  response regulator receiver  43.69 
 
 
244 aa  173  1.9999999999999998e-42  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  44.25 
 
 
225 aa  173  1.9999999999999998e-42  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  42.98 
 
 
237 aa  173  1.9999999999999998e-42  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009487  SaurJH9_1476  two component transcriptional regulator  40.37 
 
 
219 aa  173  1.9999999999999998e-42  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09290  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  43.48 
 
 
229 aa  173  1.9999999999999998e-42  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5311  two component transcriptional regulator  44.68 
 
 
246 aa  172  2.9999999999999996e-42  Frankia sp. EAN1pec  Bacteria  normal  0.554395  normal  0.310406 
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  44.84 
 
 
227 aa  172  2.9999999999999996e-42  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_010184  BcerKBAB4_2492  two component transcriptional regulator  41.26 
 
 
224 aa  172  2.9999999999999996e-42  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.22217  n/a   
 
 
-
 
NC_009767  Rcas_4351  two component transcriptional regulator  42.29 
 
 
245 aa  172  2.9999999999999996e-42  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.110039  normal 
 
 
-
 
NC_009953  Sare_4856  two component transcriptional regulator  43.3 
 
 
229 aa  172  3.9999999999999995e-42  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0324014 
 
 
-
 
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