Gene Ksed_08380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_08380 
Symbol 
ID8372347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp854299 
End bp855033 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content73% 
IMG OID644991122 
Productresponse regulator with CheY-like receiver domain and winged-helix DNA-binding domain 
Protein accessionYP_003148657 
Protein GI256824697 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.0276649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.165598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGGC CAGTGAACGA GTACGACACC GTCACCGAGA CGGGCGACCC GATGGTCGCG 
ATCATCGCCG AGGACGACGA GGACATCGCC CAGCCCTTGG CGCGGGCCAT GCGACGCGAG
GGTTTCGACG TCACCGTGGT CGGCGACGGC CCCAGCGCGC TGGTCACCGC CCGCGAGGGC
TGCACCCTGC TGATCCTGGA CATCGGGCTG CCCCGCATGG ACGGGTTGGA GGTGTGCCGC
CGGCTGCGCG CCGAGGGCCA CACGTTCCCG GTGCTCATGC TCACCGCCCG GGCCGGGGAG
ATCGACACCG TCGTCGGCCT GGACGCCGGG GCCGACGACT ACGTCACCAA GCCGTTCCGC
CTCGCGGAGT TCCACGCGCG GGTGCGGGCG CTGCTGCGCC GGCGTGCGCC GCAGGCCGGG
GGCGCCGAGG GCGACGGCTC CGACCACGGG CTGCGCATCG ACTCCTCGGC CCGCCGCGCG
TGGGTGGACG GCGAGGAGGT CACGCTCACC GCCAAGGAGT TCGACCTGCT GCACATCCTG
GTGCGCGACA TGGGCCGGGT GGTCAGCCGC GAGCAGCTCA TGCGCGAGGC CTGGCAGACC
GACTGGGTGG GGTCCACCAA GACCCTGGAC ATGCACGTCT CCGGGCTGCG CAAGAAGCTC
GGCGACGACC ACAGCGACCC CCGGTTCATC GCCACCGTGC GCGGCGTGGG CTTCCGCCTC
GTCACGGGGG AGTGA
 
Protein sequence
MAGPVNEYDT VTETGDPMVA IIAEDDEDIA QPLARAMRRE GFDVTVVGDG PSALVTAREG 
CTLLILDIGL PRMDGLEVCR RLRAEGHTFP VLMLTARAGE IDTVVGLDAG ADDYVTKPFR
LAEFHARVRA LLRRRAPQAG GAEGDGSDHG LRIDSSARRA WVDGEEVTLT AKEFDLLHIL
VRDMGRVVSR EQLMREAWQT DWVGSTKTLD MHVSGLRKKL GDDHSDPRFI ATVRGVGFRL
VTGE