| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0253 |
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| Symbol | phoB |
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| ID | 5135542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 262977 |
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| End bp | 263666 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531711 |
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| Product | DNA-binding response regulator PhoB |
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| Protein accession | YP_001216209 |
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| Protein GI | 147674650 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTAGAA GGATTCTGGT TGTTGAAGAC GAAGCACCGA TTCGTGAAAT GTTGTGTTTC
GTGCTTGAAC AAAAGGGCTA TCAGGCGGTT GAGGCTGAAG ATTATGATTC GGCGATGAGT
AAGCTGGCTG AGCCTTTTCC TGATCTCGTC CTGCTTGACT GGATGTTGCC TGGTGGTAGT
GGCATCAACC TCATCAAGCA TATGAAGCGC GAAGAGATGA CGCGCAACAT TCCTGTTGTG
ATGCTCACCG CCCGTGGTGA AGAAGAAGAT AAAGTTCGCG GCTTAGAAGT GGGCGCGGAT
GATTACATTA CCAAACCGTT TTCACCTAAA GAGTTGGTTG CCCGTTTAAA AGCGGTGATC
CGCCGTGTCA CTCCGACGGC GTTGGAGGAT GTGATTGATG TTCAAGGTTT GAAGTTAGAT
CCGGTCTCAC ACCGTGTGAC CGCTAACGAT CAGCCGTTGG ATATGGGACC GACTGAGTTC
AAGATGTTAC ACTTCTTCAT GACACACCAA GAGCGTGTGT ATAGCCGCGA GCAGCTACTC
AATAATGTTT GGGGCACCAA CGTGTATGTG GAAGATCGCA CGGTAGACGT CCACATTCGT
CGTCTACGTA AAGCCTTAGA AGACGCTGGA CATGATAAGC TGATCCAGAC GGTGCGCGGC
GCGGGGTATC GTTTTTCAAC CAAAGCCTAA
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| Protein sequence | MSRRILVVED EAPIREMLCF VLEQKGYQAV EAEDYDSAMS KLAEPFPDLV LLDWMLPGGS
GINLIKHMKR EEMTRNIPVV MLTARGEEED KVRGLEVGAD DYITKPFSPK ELVARLKAVI
RRVTPTALED VIDVQGLKLD PVSHRVTAND QPLDMGPTEF KMLHFFMTHQ ERVYSREQLL
NNVWGTNVYV EDRTVDVHIR RLRKALEDAG HDKLIQTVRG AGYRFSTKA
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