152 homologs were found in PanDaTox collection
for query gene Mrub_0877 on replicon NC_013946
Organism: Meiothermus ruber DSM 1279



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013946  Mrub_0877  ATP-dependent carboxylate-amine ligase domain-containing protein ATP-grasp  100 
 
 
386 aa  801    Meiothermus ruber DSM 1279  Bacteria  normal  0.656066  normal  0.993359 
 
 
-
 
NC_014212  Mesil_0202  ATP-dependent carboxylate-amine ligase domain protein ATP-grasp  70.8 
 
 
388 aa  572  1.0000000000000001e-162  Meiothermus silvanus DSM 9946  Bacteria  normal  0.658271  normal 
 
 
-
 
NC_009767  Rcas_4094  biotin carboxylase-like protein  58.49 
 
 
389 aa  427  1e-118  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.138669  normal  0.680577 
 
 
-
 
NC_009523  RoseRS_0906  biotin carboxylase-like protein  57.7 
 
 
386 aa  418  9.999999999999999e-116  Roseiflexus sp. RS-1  Bacteria  normal  0.17944  hitchhiker  0.00104382 
 
 
-
 
NC_008554  Sfum_2328  hypothetical protein  48.45 
 
 
385 aa  395  1e-109  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008309  HS_1642  hypothetical protein  47.94 
 
 
392 aa  360  2e-98  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0791  biotin carboxylase  29.02 
 
 
411 aa  107  3e-22  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010627  Bphy_7724  putative biotin carboxylase  27.95 
 
 
430 aa  85.1  0.000000000000002  Burkholderia phymatum STM815  Bacteria  normal  0.211642  normal 
 
 
-
 
NC_013131  Caci_3673  ATP-dependent carboxylate-amine ligase domain protein ATP-grasp  28.18 
 
 
407 aa  77.4  0.0000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_4524  Biotin carboxylase-like protein  24.58 
 
 
403 aa  70.1  0.00000000006  Spirosoma linguale DSM 74  Bacteria  normal  0.799309  normal 
 
 
-
 
NC_013037  Dfer_2846  ATP-dependent carboxylate-amine ligase domain- containing protein  22.57 
 
 
404 aa  62.8  0.00000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.435021  normal  0.117516 
 
 
-
 
NC_013440  Hoch_6150  ATP-dependent carboxylate-amine ligase domain protein ATP-grasp  26.1 
 
 
410 aa  62.8  0.00000001  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.639194 
 
 
-
 
NC_007954  Sden_3467  hypothetical protein  27.06 
 
 
407 aa  62  0.00000002  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6148  ATP-dependent carboxylate-amine ligase domain protein ATP-grasp  24.32 
 
 
408 aa  59.7  0.00000009  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.631903 
 
 
-
 
NC_004578  PSPTO_0874  nikkomycin biosynthesis domain protein  22.64 
 
 
417 aa  57.4  0.0000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2158  argininosuccinate lyase  21.86 
 
 
914 aa  55.5  0.000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1302  carbamoyl-phosphate synthase, large subunit  25.63 
 
 
1082 aa  55.8  0.000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0452  carbamoyl phosphate synthase large subunit  22.77 
 
 
1080 aa  55.8  0.000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0393  carbamoyl phosphate synthase large subunit  22.77 
 
 
1080 aa  55.8  0.000001  Xylella fastidiosa M23  Bacteria  normal  0.803496  n/a   
 
 
-
 
NC_006366  plpl0006  hypothetical protein  22.84 
 
 
387 aa  55.1  0.000002  Legionella pneumophila str. Lens  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2026  ATP-dependent carboxylate-amine ligase domain protein ATP-grasp  25 
 
 
423 aa  55.5  0.000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2002  argininosuccinate lyase  21.86 
 
 
900 aa  55.1  0.000002  Burkholderia pseudomallei 668  Bacteria  normal  0.848902  n/a   
 
 
-
 
NC_009972  Haur_2023  hypothetical protein  22.98 
 
 
408 aa  54.3  0.000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0975  carbamoyl-phosphate synthase large subunit  24.44 
 
 
1098 aa  53.5  0.000005  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2022  argininosuccinate lyase  21.46 
 
 
900 aa  52.8  0.00001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.10658  n/a   
 
 
-
 
NC_007513  Syncc9902_0836  carbamoyl phosphate synthase large subunit  24.44 
 
 
1106 aa  52  0.00002  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1047  carbamoyl phosphate synthase large subunit  23.4 
 
 
1065 aa  51.6  0.00003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007799  ECH_0378  carbamoyl phosphate synthase large subunit  19.38 
 
 
1076 aa  51.6  0.00003  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  0.546328  n/a   
 
 
-
 
NC_008786  Veis_0875  hypothetical protein  25.11 
 
 
420 aa  51.2  0.00003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.728931 
 
 
-
 
NC_009048  PICST_50410  Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase)  26.77 
 
 
1148 aa  51.6  0.00003  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.280294  normal  0.615916 
 
 
-
 
NC_010571  Oter_0679  carbamoyl-phosphate synthase, large subunit  23.77 
 
 
1095 aa  50.8  0.00004  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1812  carbamoyl phosphate synthase large subunit  21.84 
 
 
1080 aa  50.8  0.00004  Stenotrophomonas maltophilia R551-3  Bacteria  decreased coverage  0.00557421  normal  0.0258544 
 
 
-
 
NC_009091  P9301_10451  carbamoyl-phosphate synthase, large subunit  22.96 
 
 
1098 aa  50.4  0.00005  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_006365  plpp0010  hypothetical protein  22.73 
 
 
392 aa  50.4  0.00006  Legionella pneumophila str. Paris  Bacteria  decreased coverage  0.00788782  n/a   
 
 
-
 
NC_007516  Syncc9605_1819  carbamoyl phosphate synthase large subunit  22.55 
 
 
1107 aa  50.1  0.00006  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_009635  Maeo_0421  hypothetical protein  31.88 
 
 
321 aa  50.4  0.00006  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_007333  Tfu_1057  carbamoyl-phosphate synthase large subunit  24.86 
 
 
1103 aa  50.1  0.00007  Thermobifida fusca YX  Bacteria  normal  0.614826  n/a   
 
 
-
 
NC_007354  Ecaj_0635  carbamoyl phosphate synthase large subunit  18.69 
 
 
1076 aa  50.1  0.00007  Ehrlichia canis str. Jake  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00086  carbamoyl phosphate synthase large subunit  22.15 
 
 
1080 aa  50.1  0.00007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0769  carbamoyl phosphate synthase large subunit  23.2 
 
 
1057 aa  49.7  0.00008  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_12690  carbamoyl-phosphate synthase large subunit  22.79 
 
 
1118 aa  49.7  0.00009  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0359466  normal  0.0639836 
 
 
-
 
NC_008820  P9303_13841  carbamoyl phosphate synthase large subunit  23.7 
 
 
1102 aa  49.7  0.00009  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.19323 
 
 
-
 
NC_013411  GYMC61_1917  carbamoyl phosphate synthase large subunit  26.45 
 
 
1065 aa  49.3  0.0001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008816  A9601_10451  carbamoyl-phosphate synthase, large subunit  22.96 
 
 
1098 aa  48.9  0.0001  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_09001  carbamoyl-phosphate synthase, large subunit  22.96 
 
 
1100 aa  49.3  0.0001  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2313  carbamoyl-phosphate synthase, large subunit  26.9 
 
 
1079 aa  49.3  0.0001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.417995  normal  0.014378 
 
 
-
 
NC_013441  Gbro_2340  carbamoyl-phosphate synthase, large subunit  27.23 
 
 
1110 aa  48.5  0.0002  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2306  carbamoyl-phosphate synthase, large subunit  25.12 
 
 
1078 aa  48.5  0.0002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009486  Tpet_0363  carbamoyl-phosphate synthase, large subunit  23.35 
 
 
1099 aa  48.5  0.0002  Thermotoga petrophila RKU-1  Bacteria  normal  0.948928  n/a   
 
 
-
 
NC_009674  Bcer98_0162  hypothetical protein  22.78 
 
 
414 aa  48.1  0.0002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0882  carbamoyl-phosphate synthase large subunit  22.45 
 
 
1063 aa  48.1  0.0003  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_14770  carbamoyl-phosphate synthase large subunit  23.64 
 
 
1117 aa  48.1  0.0003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_1085  carbamoyl-phosphate synthase large subunit  22.68 
 
 
1080 aa  48.1  0.0003  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_010483  TRQ2_0380  carbamoyl-phosphate synthase, large subunit  23.35 
 
 
1099 aa  47.8  0.0003  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1257  carbamoyl phosphate synthase large subunit  23.14 
 
 
1072 aa  48.1  0.0003  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2586  cyanophycin synthetase  27.17 
 
 
856 aa  47.4  0.0004  Ralstonia eutropha JMP134  Bacteria  normal  0.96396  n/a   
 
 
-
 
NC_007963  Csal_1114  cyanophycin synthetase  51.11 
 
 
879 aa  47.8  0.0004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.654809  n/a   
 
 
-
 
NC_008554  Sfum_0008  carbamoyl phosphate synthase large subunit  24.23 
 
 
1080 aa  47.8  0.0004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.196188  normal 
 
 
-
 
NC_011992  Dtpsy_0636  cyanophycin synthetase  34.94 
 
 
723 aa  47.8  0.0004  Acidovorax ebreus TPSY  Bacteria  normal  0.698291  n/a   
 
 
-
 
NC_009012  Cthe_1868  carbamoyl-phosphate synthase large subunit  26.09 
 
 
1067 aa  47.8  0.0004  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2446  carbamoyl-phosphate synthase large subunit  22.81 
 
 
1106 aa  47.8  0.0004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0320  carbamoyl-phosphate synthase, large subunit  24.81 
 
 
1078 aa  47.4  0.0005  Desulfohalobium retbaense DSM 5692  Bacteria  unclonable  0.000000336143  normal 
 
 
-
 
NC_013131  Caci_2405  carbamoyl-phosphate synthase, large subunit  28.9 
 
 
1099 aa  47  0.0005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2607  hypothetical protein  24.46 
 
 
439 aa  47.4  0.0005  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.954723 
 
 
-
 
NC_010184  BcerKBAB4_3713  carbamoyl phosphate synthase large subunit  23.14 
 
 
1072 aa  47.4  0.0005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0554  Carbamoyl-phosphate synthase L chain ATP-binding  20.47 
 
 
528 aa  47  0.0005  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00479073  n/a   
 
 
-
 
NC_013205  Aaci_1308  carbamoyl-phosphate synthase, large subunit  22.96 
 
 
1082 aa  47  0.0006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_5090  hypothetical protein  22.08 
 
 
453 aa  47  0.0006  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5770  hypothetical protein  22.08 
 
 
453 aa  47  0.0006  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.0282385 
 
 
-
 
NC_008726  Mvan_2664  carbamoyl phosphate synthase large subunit  25.44 
 
 
1112 aa  47  0.0006  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.652847  normal 
 
 
-
 
NC_011884  Cyan7425_4446  Glutathione synthase  31.48 
 
 
637 aa  47  0.0006  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0612  Glutathione synthase  36.17 
 
 
622 aa  47  0.0006  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.42975 
 
 
-
 
NC_009953  Sare_1849  carbamoyl-phosphate synthase, large subunit  27.14 
 
 
1115 aa  46.6  0.0007  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0657  cyanophycin synthetase  34.94 
 
 
727 aa  46.6  0.0008  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3743  carbamoyl phosphate synthase large subunit  25.32 
 
 
1112 aa  46.6  0.0008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0558638 
 
 
-
 
NC_013124  Afer_1699  carbamoyl-phosphate synthase, large subunit  26.77 
 
 
1100 aa  46.2  0.0008  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.54095  n/a   
 
 
-
 
NC_013203  Apar_0613  carbamoyl-phosphate synthase, large subunit  28.79 
 
 
1073 aa  46.2  0.001  Atopobium parvulum DSM 20469  Bacteria  normal  0.438109  normal  0.344128 
 
 
-
 
NC_013216  Dtox_2352  carbamoyl-phosphate synthase, large subunit  22.45 
 
 
1074 aa  46.2  0.001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.374511  normal 
 
 
-
 
NC_013721  HMPREF0424_0917  carbamoyl-phosphate synthase, large subunit  24.66 
 
 
1131 aa  46.2  0.001  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_2251  phosphoribosylglycinamide synthetase  21.7 
 
 
418 aa  46.2  0.001  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000000511987 
 
 
-
 
NC_009012  Cthe_0949  carbamoyl phosphate synthase large subunit  21.21 
 
 
1072 aa  45.8  0.001  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.742849  n/a   
 
 
-
 
NC_009565  TBFG_11413  carbamoyl phosphate synthase large subunit  25.96 
 
 
1115 aa  46.2  0.001  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00750159  normal  0.0530566 
 
 
-
 
NC_013757  Gobs_3132  carbamoyl-phosphate synthase, large subunit  26.88 
 
 
1101 aa  45.8  0.001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.288772  n/a   
 
 
-
 
NC_014150  Bmur_2484  carbamoyl-phosphate synthase, large subunit  20.71 
 
 
1063 aa  46.2  0.001  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0662  carbamoyl-phosphate synthase, large subunit  21.05 
 
 
1072 aa  46.2  0.001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3031  carbamoyl phosphate synthase large subunit  22.57 
 
 
1084 aa  45.8  0.001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.144026  decreased coverage  0.0049366 
 
 
-
 
NC_003909  BCE_3931  carbamoyl phosphate synthase large subunit  23.86 
 
 
1072 aa  45.1  0.002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1042  carbamoyl phosphate synthase large subunit  25 
 
 
1060 aa  45.1  0.002  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0335  cyanophycin synthetase  30.21 
 
 
636 aa  45.1  0.002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.609672 
 
 
-
 
NC_013510  Tcur_3012  carbamoyl-phosphate synthase, large subunit  21.59 
 
 
1107 aa  45.4  0.002  Thermomonospora curvata DSM 43183  Bacteria  normal  0.541011  n/a   
 
 
-
 
NC_009380  Strop_1856  carbamoyl-phosphate synthase, large subunit  27.27 
 
 
1115 aa  45.4  0.002  Salinispora tropica CNB-440  Bacteria  normal  normal  0.977925 
 
 
-
 
NC_009455  DehaBAV1_1012  carbamoyl-phosphate synthase large subunit  22.18 
 
 
1079 aa  45.1  0.002  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4057  carbamoyl-phosphate synthase, large subunit  22.78 
 
 
1113 aa  45.4  0.002  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013206  Aaci_2987  phosphoribosylglycinamide synthetase  21.17 
 
 
410 aa  45.4  0.002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  unclonable  0.0000000000875543  n/a   
 
 
-
 
NC_009953  Sare_3064  hypothetical protein  20.62 
 
 
441 aa  45.1  0.002  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0000514586 
 
 
-
 
NC_006274  BCZK3645  carbamoyl phosphate synthase large subunit  23.86 
 
 
1072 aa  44.3  0.003  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2414  carbamoyl phosphate synthase large subunit  25.21 
 
 
1112 aa  44.7  0.003  Mycobacterium sp. KMS  Bacteria  normal  0.271398  normal  0.318582 
 
 
-
 
NC_013093  Amir_2663  ATP-dependent carboxylate-amine ligase domain protein ATP-grasp  26.61 
 
 
413 aa  44.7  0.003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2408  carbamoyl phosphate synthase large subunit  25.21 
 
 
1112 aa  44.7  0.003  Mycobacterium sp. JLS  Bacteria  normal  0.415819  normal 
 
 
-
 
NC_011658  BCAH187_A3935  carbamoyl phosphate synthase large subunit  23.86 
 
 
1072 aa  44.3  0.003  Bacillus cereus AH187  Bacteria  normal  0.144651  n/a   
 
 
-
 
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