| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0906 |
|---|
| Symbol | |
|---|
| ID | 5207852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1120771 |
|---|
| End bp | 1121931 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640594520 |
|---|
| Product | biotin carboxylase-like protein |
|---|
| Protein accession | YP_001275265 |
|---|
| Protein GI | 148655060 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.17944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00104382 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTTG TCTTTCTCTC GCCGCACTTT CCGCCAAACT GGCGTCTGTT CTGCGTCCGC
CTGCGCAACC TGGGAGCGAA TGTACTCGGC ATTGCCGACG AGCCATACGA ACTGTTGCAC
CCCGATCTGC GCGCAGCCCT GACCGAGTAT TACCGCGTAT CGGATCTGCA CAACTACGAT
GAAGTGCTGC GCGCCCTCGG CTATTTTACC CACCGCTACG GCAAAATCCA GCGCATCGAC
TCGCTCAACG AATACTGGCT GGAAACCGAG GCGCACCTGC GCACCGATTT CAATATCGAA
GGACCGAAGA TCGCCGATCT ACCGCGTATG AAGCGTAAAT CGGAGATGAA ACGCCTCTTT
ACCCGCGCCC AGGTGGATGT CGCGCGCGGG ATTCTGGTCG ACTCGCCAGC CCGTGCGCGC
GCCTTCGTCG CCTCGGTGGG GTATCCGGTC GTTGCCAAAC CGGACATCGG CGTTGGGGCG
AACCATACCT TCAAAATCGT CAACGACGCC GAACTCGAGG CGTTTCTGAT GAGCAAGCCG
GAGGGGTATC TGCTCGAAGA GTATGTCCAC GGCGTCATTC AGACATTCGA CGGACTGACG
GATCGGTATG GCGAACCGGT CTTCTTCACG TCGATGCAGT ATAGCGACGG TGTGATGGAG
ATCGTCATCA ACGATGATGA CATTTTCTAC CTCACCGAAC GGCACATCCC TCCCGATCTC
GAGCAGGCTG GTCGGCGCAT CCTGGCGCTC TTCGACGTGC GCGAACGTTT CTTTCACTTT
GAGTTCTTCC GCACTCCCGA AGGGCGACTG GTGGCGCTCG AGGTCAACCT GCGACCGCCG
GGTGGTCTGA GCATCGATAT GTTCAACTAT GCCAGCAACA TTGACCTCTA CGACGCCTGG
GCGCACGTGG CGCTCCATCA ACCCTGGCAG GCGCCGCCGG AGCGCCCATA CCACGTGTGC
TACGCCGGAC GCAAACCCCT GCGACCGTAT GCGCTCACGC ACGCCGAGAT CATGGCGCGG
TTCGGTGATC GCATCGTCCA TCATCAACCG ATGCCCGACC TCTTTCATCG AGCAATGGGC
GCGTATGCAT ACCTCATCCG ATCACCCGAC CGTCAGGAAG TGCTTGCCAT TGCCCGGCAG
ATTCAGCGAC TGAACGTCTG A
|
|---|
| Protein sequence | MNVVFLSPHF PPNWRLFCVR LRNLGANVLG IADEPYELLH PDLRAALTEY YRVSDLHNYD
EVLRALGYFT HRYGKIQRID SLNEYWLETE AHLRTDFNIE GPKIADLPRM KRKSEMKRLF
TRAQVDVARG ILVDSPARAR AFVASVGYPV VAKPDIGVGA NHTFKIVNDA ELEAFLMSKP
EGYLLEEYVH GVIQTFDGLT DRYGEPVFFT SMQYSDGVME IVINDDDIFY LTERHIPPDL
EQAGRRILAL FDVRERFFHF EFFRTPEGRL VALEVNLRPP GGLSIDMFNY ASNIDLYDAW
AHVALHQPWQ APPERPYHVC YAGRKPLRPY ALTHAEIMAR FGDRIVHHQP MPDLFHRAMG
AYAYLIRSPD RQEVLAIARQ IQRLNV
|
|---|
| |