Gene SAG1042 details

Gene Information

• Locus tag: SAG1042
• Symbol: carB
• ID: 1013846
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: -
• Start bp: 1049346
• End bp: 1052528
• Gene Length: 3183 bp
• Protein Length: 1060 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637316225
• Product: carbamoyl phosphate synthase large subunit
• Protein accession: NP_688052
• Protein GI: 22537201
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit; [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAGC GCACAGACAT ACGTAAAATT ATGGTTATCG GTTCTGGCCC GATTGTGATT 
GGACAAGCAG CAGAGTTTGA CTATTCTGGT ACACAAGCCT GTCTCTCTTT AAAAGAGGAG 
GGATACCAAG TTGTTTTGGT CAATTCGAAT CCAGCTACTA TCATGACAGA TAAAGATATT 
GCTGATAAAG TTTATATTGA ACCTATTACC TTGGAGTTTG TCACAAGAAT TCTCAGGAAG 
GAAAGACCTG ATGCTCTCCT TCCAACTCTT GGAGGTCAAA CTGGATTGAA TATGGCTATG 
GCTCTATCAA AAAATGGTAT CCTAGAAGAA TTGAATGTTG AACTATTAGG GACCAAATTA 
TCAGCCATTG ATAAAGCTGA AGATCGTGAT TTATTTAAAC AGTTGATGGA AGAACTCAAT 
CAACCTATTC CAGAATCTGA GATTGTTAAT TCGGTAGAAG AAGCTATTCA ATTTGCAGAG 
CAAATCGGGT ATCCATTAAT TGTTCGTCCT GCCTTTACTT TAGGAGGTAC AGGTGGAGGC 
ATGTGCGATA ATCAAGAACA ATTGGTTGAC ATCACGACGA AGGGGTTAAA GTTATCGCCT 
GTGACACAGT GCCTTATTGA ACGTTCAATT GCTGGCTTTA AAGAGATTGA ATACGAAGTT 
ATGCGTGATG CAGCAGATAA CGCTCTTGTT GTTTGTAATA TGGAGAATTT TGATCCTGTT 
GGTATCCATA CAGGGGACTC TATAGTTTTT GCACCCGCAC AAACGTTATC TGATGTGGAA 
AATCAGTTAT TACGAGATGC GAGTTTAGAT ATTATAAGAG CTTTGAAAAT TGAAGGAGGA 
TGCAATGTTC AACTAGCCCT TGATCCGAAT AGTTTTAAAT ACTATGTCAT TGAAGTTAAT 
CCAAGAGTAT CAAGATCTTC TGCTTTAGCT TCAAAAGCTA CTGGATATCC AATTGCTAAA 
TTAGCAGCTA AGATAGCTGT TGGTTTGACA CTAGATGAGG TAATTAATCC TATTACAAAA 
ACGACTTACG CTATGTTTGA ACCTGCTTTA GATTACGTAG TCGCAAAAAT GCCGAGATTT 
CCTTTTGATA AATTTGAAAG TGGCGATAGA AAATTGGGAA CACAGATGAA AGCTACAGGC 
GAAGTCATGG CAATAGGACG GAATATAGAA GAATCTTTGT TGAAAGCTTG TCGTTCACTA 
GAAATAGGTG TCGATCACAT TAAAATAGCA GATTTAGATA ATGTATCAGA TGATGTTTTA 
TTAGAAAAAA TAAGAAAGGC AGAAGATGAT CGCTTATTTT ATCTAGCAGA AGCTTTACGT 
AGACATTATA GTATTGAAAA ATTAGCAAGT TTGACTAGCA TTGATTCTTT CTTCCTTGAT 
AAGTTAAGAG TGATTGTAGA GTTAGAAGAT CTATTATCTA AAAACAGACT GGATATCAAT 
ATTCTCAAAA AGGTTAAAAA TAAAGGTTTT TCAGATAAAG CTATAGCGAG TTTATGGCAA 
ATAAACGAAG ATCAAGTTCG TAACATGCGA AAAGAAGCAG GAATTCTTCC AGTTTATAAG 
ATGGTTGATA CATGTGCGTC TGAGTTTGAT TCAGCAACGC CCTACTTTTA TTCGACTTAT 
GCCGTAGAAA ACGAGTCATT GATATCAGAT AAAGCCTCTA TTTTGGTTTT AGGATCGGGC 
CCAATCCGAA TTGGACAGGG AGTTGAATTT GATTATGCAA CGGTTCATTC TGTTAAAGCC 
ATCAGAGAGT CTGGTTTTGA AGCGATTATC ATGAACTCTA ATCCAGAGAC GGTCTCAACG 
GATTTCTCTA TTTCAGATAA GCTTTACTTT GAACCTTTGA CTTTTGAAGA TGTTATGAAT 
GTTATTGACT TAGAAAAACC TGAAGGGGTC ATCTTACAAT TCGGTGGTCA GACTGCTATT 
AATCTAGCAA AAGATTTAAA CAAGGCAGGG GTTAAAATAC TAGGCACACA ATTAGAAGAT 
TTGGATCGTG CTGAAAATAG AAAACAATTT GAAGCCACTT TACAAGCTCT AAATATCCCT 
CAACCACCAG GTTTTACCGC CACTACGGAG GAAGAGGCAG TTAATGCAGC GCAAAAGATT 
GGTTATCCCG TGTTGGTTAG ACCATCATAT GTTCTTGGTG GACGAGCTAT GAAGATAGTT 
GAAAACGAAG AAGATTTACG TCATTATATG ACAACCGCGG TAAAGGCAAG CCCAGATCAT 
CCAGTGCTTA TAGATGCATA CCTTATAGGT AAAGAGTGTG AGGTTGATGC TATATCCGAT 
GGTCAGAATA TACTGATTCC TGGAATAATG GAACATATAG AGCGATCTGG TGTTCATTCA 
GGAGATTCCA TGGCTGTATA TCCTCCTCAA ACATTGTCTG AGACCATTAT CGAAACTATT 
GTAGATTATA CAAAACGCTT AGCAATTGGA TTAAACTGTA TCGGTATGAT GAATATTCAG 
TTTGTAATCA AGGATCAGAA AGTATATGTT ATTGAAGTTA ATCCTCGTGC TAGTAGAACA 
CTTCCATTCT TATCAAAAGT AACTCACATT CCTATGGCCC AAGTAGCAAC AAAAGTTATC 
TTAGGAGATA AACTCTGCAA TTTTACATAT GGTTATGATC TCTATCCAGC TTCAGATATG 
GTCCACATTA AAGCCCCTGT CTTTAGTTTT ACCAAACTTG CTAAAGTAGA TAGTTTATTA 
GGTCCTGAAA TGAAATCAAC AGGCGAAGTG ATGGGATCAG ATATTAATCT TCAGAAAGCC 
TTGTATAAAG CCTTTGAAGC AGCATATCTC CATATGCCAG ACTATGGTAA CATTGTTTTT 
ACAGTAGATG ATACAGATAA AGAAGAAGCT TTAGAACTTG CAAAAGTCTA TCAAAGTATT 
GGTTATCGTA TTTATGCTAC CCAAGGGACT GCAATTTATT TTGATGCTAA TGGTTTAGAG 
ACAGTTTTAG TAGGTAAGTT AGGAGAGAAC GATCGAAATC ATATTCCTGA TTTAATTAAA 
AATGGTAAGA TTCAAGCAGT TATCAACACA GTTGGACAAA ATAACATTGA TAACCATGAT 
GCTCTCATCA TCAGACGTTC TGCAATTGAA CAAGGAGTTC CTCTATTTAC ATCTTTAGAT 
ACTGCACATG CAATGTTCAA AGTTCTTGAA AGCAGAGCAT TTACATTAAA AGTACTAGAT 
TAA 

 

Protein sequence

MPKRTDIRKI MVIGSGPIVI GQAAEFDYSG TQACLSLKEE GYQVVLVNSN PATIMTDKDI 
ADKVYIEPIT LEFVTRILRK ERPDALLPTL GGQTGLNMAM ALSKNGILEE LNVELLGTKL 
SAIDKAEDRD LFKQLMEELN QPIPESEIVN SVEEAIQFAE QIGYPLIVRP AFTLGGTGGG 
MCDNQEQLVD ITTKGLKLSP VTQCLIERSI AGFKEIEYEV MRDAADNALV VCNMENFDPV 
GIHTGDSIVF APAQTLSDVE NQLLRDASLD IIRALKIEGG CNVQLALDPN SFKYYVIEVN 
PRVSRSSALA SKATGYPIAK LAAKIAVGLT LDEVINPITK TTYAMFEPAL DYVVAKMPRF 
PFDKFESGDR KLGTQMKATG EVMAIGRNIE ESLLKACRSL EIGVDHIKIA DLDNVSDDVL 
LEKIRKAEDD RLFYLAEALR RHYSIEKLAS LTSIDSFFLD KLRVIVELED LLSKNRLDIN 
ILKKVKNKGF SDKAIASLWQ INEDQVRNMR KEAGILPVYK MVDTCASEFD SATPYFYSTY 
AVENESLISD KASILVLGSG PIRIGQGVEF DYATVHSVKA IRESGFEAII MNSNPETVST 
DFSISDKLYF EPLTFEDVMN VIDLEKPEGV ILQFGGQTAI NLAKDLNKAG VKILGTQLED 
LDRAENRKQF EATLQALNIP QPPGFTATTE EEAVNAAQKI GYPVLVRPSY VLGGRAMKIV 
ENEEDLRHYM TTAVKASPDH PVLIDAYLIG KECEVDAISD GQNILIPGIM EHIERSGVHS 
GDSMAVYPPQ TLSETIIETI VDYTKRLAIG LNCIGMMNIQ FVIKDQKVYV IEVNPRASRT 
LPFLSKVTHI PMAQVATKVI LGDKLCNFTY GYDLYPASDM VHIKAPVFSF TKLAKVDSLL 
GPEMKSTGEV MGSDINLQKA LYKAFEAAYL HMPDYGNIVF TVDDTDKEEA LELAKVYQSI 
GYRIYATQGT AIYFDANGLE TVLVGKLGEN DRNHIPDLIK NGKIQAVINT VGQNNIDNHD 
ALIIRRSAIE QGVPLFTSLD TAHAMFKVLE SRAFTLKVLD