Gene Slin_4524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4524 
Symbol 
ID8728288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5485097 
End bp5486308 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content56% 
IMG OID 
ProductBiotin carboxylase-like protein 
Protein accessionYP_003389303 
Protein GI284039373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.799309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAC TTTCTTTTCT GTGCATCGCC ACGTTCTTCA AAGGTCAGGA TTTCATGAAA 
GCCTGTAAAG AGTTAGGAAA CACGGTTTAC CTGTTAACCG ACCAGAAACT TGCCAATGAA
GCATGGCCCC GTGAGTCCAT CGACGAGTTT TTTTTCCTGC CATCGCCCAG CAACGCACCC
GACGTGCTAG ACCAGATGAT TACGGGACTG GCTCATGCAA TGCGCTCCCG CCGAATCGAC
CGGGTGGTAG CTCTGGATGA CTTCGATGTA GAGAAAGGAG CCCTTATTCG CGAAACCTTC
CGCATCGACG GGATGGGCCA GACCACGGCG CGTTACTTCC GGGATAAGCT GGCAATGCGG
ACGCGCGCCT TTGCCGCCGG AATTCGCGTC CCAACGTTCT GCTCACTTTT CCACAACGAA
ACCGTCACGG CGTTTTTGCA AACCACCGAA GCACCCTGGC TCATAAAACC CCGTTCGGAA
GCGTCGGCAA CGGGGATTCG GAAAGTACAT TCGCTGGATG AAGCCTGGTC GGCTATTCAT
TTGCTGGGCG AGAACCGACA TAATTACCTC ATCGAGGAGT TTAAGCCGGG GACGGTCTAC
CATGTCGACT CTTTATCGGT AGATGGCAAA GCCGTGTTTA CGCGGGTCAG CCAATACCTG
GCGACGCCGA TGGAAGTGTC GCATGGGGGC GGCATTTTCC GGACGGTAAC GCTGCCCCTC
CACACGCCCG AAACCGACGC GCTACGGCAG ATTAACGATC AGGTATTGTC GGCTTTCGGG
ATGCGGTATA GTGCCTCACA TTCCGAATAT ATCCGGGGCG ATCATGACGG GGAGCTATAT
TTTCTGGAAA CGTCCTCGCG CGTGGGTGGC GCTCACATTG CCGAGATGGT CGAAGCGGCC
TCGGGCGTGA ACCTATGGCG CGAATGGGCT AAACTCGAAA CCGCCATTGC GCATAAAGAA
CATTACATTC CGCCCACCGA TACGGGCCGC CATGCCGGGT TGATTATTTC CCTCGCCCGG
CAGCAATGGC CCGACTTGTC GGTATTTAGC GACCCGGAAG TTTGCTGGCG CATCAGCCGC
GAATACCACG TCGGGCTCAT CGCCCAAGCC GGCGATCGGG GCCGCATTCG AACCCTGCTG
GACGAGTACA TGCACCGCAT CTACACCGAA TTCCACGCAT CCGCACCCTT GCCCGATAAG
CCAACGAATT AA
 
Protein sequence
MSQLSFLCIA TFFKGQDFMK ACKELGNTVY LLTDQKLANE AWPRESIDEF FFLPSPSNAP 
DVLDQMITGL AHAMRSRRID RVVALDDFDV EKGALIRETF RIDGMGQTTA RYFRDKLAMR
TRAFAAGIRV PTFCSLFHNE TVTAFLQTTE APWLIKPRSE ASATGIRKVH SLDEAWSAIH
LLGENRHNYL IEEFKPGTVY HVDSLSVDGK AVFTRVSQYL ATPMEVSHGG GIFRTVTLPL
HTPETDALRQ INDQVLSAFG MRYSASHSEY IRGDHDGELY FLETSSRVGG AHIAEMVEAA
SGVNLWREWA KLETAIAHKE HYIPPTDTGR HAGLIISLAR QQWPDLSVFS DPEVCWRISR
EYHVGLIAQA GDRGRIRTLL DEYMHRIYTE FHASAPLPDK PTN